RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 IL17RDQ8NFM7 739 aa12.16□□□□□ -0.46
PRPF40B-202ENST00000380281 NETO1Q8TDF5 533 aa12.16□□□□□ -0.46
PRPF40B-202ENST00000380281 SLC13A3Q8WWT9 602 aa12.16□□□□□ -0.46
PRPF40B-202ENST00000380281 FAM120BQ96EK7 910 aaKnown RBP12.16□□□□□ -0.46
PRPF40B-202ENST00000380281 ASB2Q96Q27 587 aa12.16□□□□□ -0.46
PRPF40B-202ENST00000380281 INPP5KQ9BT40 448 aa12.16□□□□□ -0.46
PRPF40B-202ENST00000380281 UCKL1Q9NWZ5 548 aa12.16□□□□□ -0.46
PRPF40B-202ENST00000380281 PRSS21Q9Y6M0 314 aa12.16□□□□□ -0.46
PRPF40B-202ENST00000380281 PLXNB2O15031 1838 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 A0A1W2PQ72 361 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 FFAR2O15552 330 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 TSPAN12O95859 305 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 GLULP15104 373 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 ATP4BP51164 291 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 RHOAP61586 193 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 EMX2Q04743 252 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 MADCAM1Q13477 382 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 SYT16Q17RD7 645 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 MORN1Q5T089 497 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 Q6ZPB1 254 aaPredicted RBP12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 SPATA19Q7Z5L4 167 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 P2RY8Q86VZ1 359 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 ZNF683Q8IZ20 524 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 RHEBL1Q8TAI7 183 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 GTF3C2Q8WUA4 911 aaPredicted RBP12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 FAR1Q8WVX9 515 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 C1orf74Q96LT6 269 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 PPP1R2P1Q96PQ5 205 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 SYT17Q9BSW7 474 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 NARFLQ9H6Q4 476 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 FAM118AQ9NWS6 357 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 MAT2BQ9NZL9 334 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 LINC00854A0A1B0GVQ3 168 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 H0YAE9 185 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 ZW10O43264 779 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 WISP3O95389 354 aaPredicted RBP12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 KLKB1P03952 638 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 CYP11A1P05108 521 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 ALPLP05186 524 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 PCMT1P22061 227 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 DNAJB1P25685 340 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 AKT1P31749 480 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 ALDH3A2P51648 485 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 CYP4F2P78329 520 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 CYP4F3Q08477 520 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 ARHGEF6Q15052 776 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 FXNQ16595 210 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 PARP15Q460N3 678 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 RTP2Q5QGT7 225 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 RBM48Q5RL73 367 aaKnown RBP12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 ZFAND4Q86XD8 727 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 LMNTD1Q8N9Z9 388 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 MYLIPQ8WY64 445 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 RORBQ92753 470 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 TPD52L3Q96J77 140 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 DPH2Q9BQC3 489 aaPredicted RBP12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 ATG10Q9H0Y0 220 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 NLE1Q9NVX2 485 aaPredicted RBP12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 ERVK-18Q9QC07 812 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 PIKFYVEQ9Y2I7 2098 aa12.15□□□□□ -0.46
PRPF40B-202ENST00000380281 CXCR6O00574 342 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 ULK1O75385 1050 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 PRAMEF1O95521 474 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 RAP2AP10114 183 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 C7P10643 843 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 ITPKAP23677 461 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 TACR1P25103 407 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 CCND3P30281 292 aaPredicted RBP12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 CORO1AP31146 461 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 ZNF140P52738 457 aaPredicted RBP12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 NFKB2Q00653 900 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 RAPSNQ13702 412 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 LAIR2Q6ISS4 152 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 CES5AQ6NT32 575 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 SERPINA9Q86WD7 417 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 SNX18Q96RF0 628 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 NMRK2Q9NPI5 230 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 C14orf119Q9NWQ9 140 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 SNX6Q9UNH7 406 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 UPK1AO00322 258 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 OR7A17O14581 309 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 PRSS23O95084 383 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 CLDN7O95471 211 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 FLT3LGP49771 235 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 EEFSECP57772 596 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 POU6F2P78424 691 aaPredicted RBP12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 RFLNAQ6ZTI6 216 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 TPGS1Q6ZTW0 290 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 VTCN1Q7Z7D3 282 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 RGL4Q8IZJ4 473 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 SVOPQ8N4V2 548 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 HDAC2Q92769 488 aaKnown RBP12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 EID2BQ96D98 161 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 CCDC120Q96HB5 630 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 APOLD1Q96LR9 279 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 NECTIN4Q96NY8 510 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 ZIC5Q96T25 663 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 ROGDIQ9GZN7 287 aa12.14□□□□□ -0.47
PRPF40B-202ENST00000380281 ZBTB20Q9HC78 741 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms