RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ZCCHC18P0CG32 403 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 CDH1P12830 882 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 VIPR2P41587 438 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 HALP42357 657 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 TXNL4AP83876 142 aaKnown RBP10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 IRF8Q02556 426 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 CHIT1Q13231 466 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 PTGR1Q14914 329 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 CYP51A1Q16850 503 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 GAB4Q2WGN9 574 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 FAM174BQ3ZCQ3 159 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 SGO1Q5FBB7 561 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 C10orf62Q5T681 223 aaPredicted RBP10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 C9orf64Q5T6V5 341 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 GRHL2Q6ISB3 625 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 TMEM220Q6QAJ8 160 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 SUSD1Q6UWL2 747 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 ZBTB49Q6ZSB9 765 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 ADGRD2Q7Z7M1 963 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 RBM23Q86U06 439 aaKnown RBP10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 THOC6Q86W42 341 aaKnown RBP10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 IFNEQ86WN2 208 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 CPA6Q8N4T0 437 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 OR52E4Q8NGH9 312 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 STARD8Q92502 1023 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 NXPE3Q969Y0 559 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 RAB7BQ96AH8 199 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 ARRDC3Q96B67 414 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 LINC00615Q96LM1 132 aaPredicted RBP10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 SEMA6AQ9H2E6 1030 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 COQ10BQ9H8M1 238 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 ZFP14Q9HCL3 533 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 GMPR2Q9P2T1 348 aaKnown RBP10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 AURKCQ9UQB9 309 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 SLC22A14Q9Y267 594 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 C2orf16Q68DN1 1984 aa10.18□□□□□ -0.78
POLR2J3-201ENST00000379340 FAM186AA6NE01 2351 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 GVINP1Q7Z2Y8 2422 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 A0A096LPI6 279 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 C17orf113A0A1B0GUU1 675 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 HEPACAM2A8MVW5 462 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 H0YIV9 168 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 SPINT1O43278 529 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 ANXA6P08133 673 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 FAM58BPP0C7Q3 252 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 ADRB3P13945 408 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 AMD1P17707 334 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 PSMC3P17980 439 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 GGT1P19440 569 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 S100A3P33764 101 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 EIF2DP41214 584 aaKnown RBP10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 DGKQP52824 942 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 CTSCP53634 463 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 POLE2P56282 527 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 C21orf58P58505 322 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 PRKCQQ04759 706 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 CYP4F3Q08477 520 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 E2F2Q14209 437 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 ZNF234Q14588 700 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 ZXDCQ2QGD7 858 aaPredicted RBP10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 ZNF658BQ4V348 819 aaPredicted RBP10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 RUNDC3AQ59EK9 446 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 SPANXN4Q5MJ08 99 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 LRIF1Q5T3J3 769 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 TMTC4Q5T4D3 741 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 ATG9BQ674R7 924 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 GLYATQ6IB77 296 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 AGTRAPQ6RW13 159 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 TMC5Q6UXY8 1006 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 CHERPQ8IWX8 916 aaKnown RBP10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 GALNT4Q8N4A0 578 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 BEND7Q8N7W2 519 aaPredicted RBP10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 ZNF366Q8N895 744 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 MFSD2AQ8NA29 543 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 TERB1Q8NA31 727 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 OR56A3Q8NH54 315 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 REPS1Q96D71 796 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 ITCHQ96J02 903 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 PPM1MQ96MI6 270 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 TMEM74Q96NL1 305 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 OR52E6Q96RD3 313 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 TMEM245Q9H330 911 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 IGFLR1Q9H665 355 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 ZNF696Q9H7X3 374 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 BRF2Q9HAW0 419 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 NDUFA13Q9P0J0 144 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 SLAMF8Q9P0V8 285 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 STOX2Q9P2F5 926 aaPredicted RBP10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 ZNHIT2Q9UHR6 403 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 PADI4Q9UM07 663 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 GPR34Q9UPC5 381 aa10.17□□□□□ -0.78
POLR2J3-201ENST00000379340 LRRK1Q38SD2 2015 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 COL4A3Q01955 1670 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 FAM220BPB1ANY3 271 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 H3BM21 787 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 VEGFDO43915 354 aa10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 LZTS3O60299 673 aaPredicted RBP10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 RECQL5O94762 991 aaPredicted RBP10.16□□□□□ -0.78
POLR2J3-201ENST00000379340 MYO1DO94832 1006 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms