RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 NAA20P61599 178 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 HERVK_113P63132 956 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 TOR1AIP1Q5JTV8 583 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 CLNKQ7Z7G1 428 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 DHFR2Q86XF0 187 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 CEP97Q8IW35 865 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 DNASE1L2Q92874 299 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 PLEKHG4BQ96PX9 1271 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 MCCC1Q96RQ3 725 aaPredicted RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 ERVK-6Q9BXR3 956 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 OR8D2Q9GZM6 311 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 NOP53Q9NZM5 478 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 GIMAP2Q9UG22 337 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 RAPGEFL1Q9UHV5 662 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 MMP17Q9ULZ9 603 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 VPS4AQ9UN37 437 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 SH3GLB1Q9Y371 365 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 FEZF1A0PJY2 475 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 SAC3D1A6NKF1 404 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 DNAJC8O75937 253 aaPredicted RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 PROS1P07225 676 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 ZDHHC11BP0C7U3 371 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 CCNYL3P0C7X3 344 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 ME2P23368 584 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 RBMS1P29558 406 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 HOXC13P31276 330 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 PNLIPRP1P54315 467 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 WSCD2Q2TBF2 565 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 FAM214AQ32MH5 1076 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 FAM174BQ3ZCQ3 159 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 ZC3H12BQ5HYM0 836 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 PLEKHS1Q5SXH7 462 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 ZNF555Q8NEP9 628 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 NELL1Q92832 810 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 KIAA1191Q96A73 305 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 DACT3Q96B18 629 aaPredicted RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 GFM1Q96RP9 751 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 TUBGCP6Q96RT7 1819 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 PRRG4Q9BZD6 226 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 SEMA3GQ9NS98 782 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 ATP6V1HQ9UI12 483 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 SARDHQ9UL12 918 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 ZFHX2Q9C0A1 2572 aaPredicted RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 KRT75O95678 551 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 IMPDH1P20839 514 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 SLC6A2P23975 617 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 FEN1P39748 380 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 AFF3P51826 1226 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 PTPN5P54829 565 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 RPS13P62277 151 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 SQLEQ14534 574 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 TMEM196Q5HYL7 178 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 KIAA0895LQ68EN5 471 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 UBALD2Q8IYN6 164 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 TMEM156Q8N614 296 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 ZNF563Q8TA94 476 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 OLFM1Q99784 485 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 KCNH6Q9H252 994 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 ZCCHC3Q9NUD5 404 aaKnown RBP8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 POLR1DQ9Y2S0 133 aa8.23□□□□□ -1.09
CRNKL1-202ENST00000377340 HNRNPCL2B2RXH8 293 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 H3BNH8 94 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 RTCAO00442 366 aaKnown RBP8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 JUNP05412 331 aaKnown RBP8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 COX4I1P13073 169 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 IL1RNP18510 177 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 PDHA2P29803 388 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 ASMTP46597 345 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 LEPRP48357 1165 aaKnown RBP8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 SLC7A2P52569 658 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 NKX3-2P78367 333 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 CSTF3Q12996 717 aaKnown RBP8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 FBXW10Q5XX13 1052 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 TNFAIP8L2Q6P589 184 aaPredicted RBP8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 DPPA4Q7L190 304 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 NUDT13Q86X67 352 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 FAM110BQ8TC76 370 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 GPR151Q8TDV0 419 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 VPS33AQ96AX1 596 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 MRGPRX1Q96LB2 322 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 NSUN5Q96P11 429 aaKnown RBP8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 NMUR2Q9GZQ4 415 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 REXO4Q9GZR2 422 aaKnown RBP8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 KRT84Q9NSB2 600 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 SCHIP1Q9P0W5 487 aaPredicted RBP8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 LRIT1Q9P2V4 623 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 ANGPT4Q9Y264 503 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 POM121BA6NF01 834 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 CCND1P24385 295 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 TAS2R50P59544 299 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 FAM98BQ52LJ0 330 aaKnown RBP8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 INTS11Q5TA45 600 aaKnown RBP8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 STK32CQ86UX6 486 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 TMC8Q8IU68 726 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 PLXDC1Q8IUK5 500 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 IL17RCQ8NAC3 791 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 VANGL1Q8TAA9 524 aaPredicted RBP8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 RGMAQ96B86 450 aa8.22□□□□□ -1.09
CRNKL1-202ENST00000377340 ITCHQ96J02 903 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms