RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 HIPK1Q86Z02 1210 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 PROX1Q92786 737 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 DNASE1L2Q92874 299 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 PYURFQ96I23 114 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 MBLAC1A4D2B0 266 aaPredicted RBP11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 CDK2AP1O14519 115 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 PER2O15055 1255 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 HOXC11O43248 304 aaPredicted RBP11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 AIREO43918 545 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 PCDHGA12O60330 932 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 CCNKO75909 580 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 GUCA1CO95843 209 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 CXCR2P25025 360 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 CDKN2CP42773 168 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 NRIP1P48552 1158 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 GZMMP51124 257 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 TRAF3Q13114 568 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 AADATQ8N5Z0 425 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 TTC29Q8NA56 475 aaPredicted RBP11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 LILRB4Q8NHJ6 448 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 MTFMTQ96DP5 389 aaKnown RBP11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 ZYG11BQ9C0D3 744 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 SNX6Q9UNH7 406 aa11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 MRPS23Q9Y3D9 190 aaKnown RBP11.22□□□□□ -0.61
TM9SF2-201ENST00000376387 LOC100506127A0A0U1RQW1 187 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 NOTOA8MTQ0 251 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 WASH4PA8MWX3 477 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 H0Y626 953 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 NBNO60934 754 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 RECQL5O94762 991 aaPredicted RBP11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 TRIM16O95361 564 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 ITGB1P05556 798 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 THP07101 528 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 PCSK1P29120 753 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 GNALP38405 381 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 RGRP47804 291 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 ZNF140P52738 457 aaPredicted RBP11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 ZNF181Q2M3W8 571 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 DUSP28Q4G0W2 176 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 ZC3H12BQ5HYM0 836 aaKnown RBP11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 TPRG1LQ5T0D9 272 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 METTL11BQ5VVY1 283 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 IL17RDQ8NFM7 739 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 OR52E6Q96RD3 313 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 PKMYT1Q99640 499 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 CDADC1Q9BWV3 514 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 ABCG8Q9H221 673 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 PLSCR2Q9NRY7 297 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 FBXL12Q9NXK8 326 aa11.21□□□□□ -0.61
TM9SF2-201ENST00000376387 AGRPO00253 132 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 GPR182O15218 404 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 RNGTTO60942 597 aaKnown RBP11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 KRT75O95678 551 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 VIPP01282 170 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 NTRK1P04629 796 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 HSPA7P48741 367 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 GTF2H2Q13888 395 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 NDUFA5Q16718 116 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 FAM171A1Q5VUB5 890 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 NXNL2Q5VZ03 156 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 KDM4DQ6B0I6 523 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 FBXL22Q6P050 247 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 GTF2H2CQ6P1K8 395 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 VTCN1Q7Z7D3 282 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 GPR152Q8TDT2 470 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 DACT3Q96B18 629 aaPredicted RBP11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 IPPKQ9H8X2 491 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 C14orf119Q9NWQ9 140 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 PDP1Q9P0J1 537 aaPredicted RBP11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 TRMT6Q9UJA5 497 aaKnown RBP11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 UGT2A1Q9Y4X1 527 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 NLRC5Q86WI3 1866 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 ISPDA4D126 451 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 ARL5CA6NH57 179 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 RGS13O14921 159 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 KMOO15229 486 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 TLR5O60602 858 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 POMCP01189 267 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 EIF2S1P05198 315 aaKnown RBP11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 FGF1P05230 155 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 RETP07949 1114 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 AKT1P31749 480 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 SLC19A1P41440 591 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 IL2P60568 153 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 UPP1Q16831 310 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 SCN4BQ8IWT1 228 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 REM2Q8IYK8 340 aaPredicted RBP11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 NKAPQ8N5F7 415 aaKnown RBP11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 SETD9Q8NE22 299 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 Q96MT0 163 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 DPY30Q9C005 99 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 NSUN3Q9H649 340 aaKnown RBP11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 NLE1Q9NVX2 485 aaPredicted RBP11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 TMEM248Q9NWD8 314 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 ELOVL2Q9NXB9 296 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 TBC1D14Q9P2M4 693 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 FKBPLQ9UIM3 349 aa11.21□□□□□ -0.62
TM9SF2-201ENST00000376387 PTPRDP23468 1912 aa11.2□□□□□ -0.62
TM9SF2-201ENST00000376387 TRBV5-3A0A0A0MS03 114 aa11.2□□□□□ -0.62
TM9SF2-201ENST00000376387 CLDN24A6NM45 220 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 239 ms