RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 LSAMPQ13449 338 aa18.32■□□□□ 0.52
PPP1R3F-202ENST00000376188 ACOX1Q15067 660 aa18.32■□□□□ 0.52
PPP1R3F-202ENST00000376188 CYBRD1Q53TN4 286 aa18.32■□□□□ 0.52
PPP1R3F-202ENST00000376188 ZNF648Q5T619 568 aaPredicted RBP18.32■□□□□ 0.52
PPP1R3F-202ENST00000376188 PATL1Q86TB9 770 aaKnown RBP18.32■□□□□ 0.52
PPP1R3F-202ENST00000376188 GPR180Q86V85 440 aa18.32■□□□□ 0.52
PPP1R3F-202ENST00000376188 ZNF786Q8N393 782 aa18.32■□□□□ 0.52
PPP1R3F-202ENST00000376188 RASGEF1AQ8N9B8 481 aa18.32■□□□□ 0.52
PPP1R3F-202ENST00000376188 ING5Q8WYH8 240 aa18.32■□□□□ 0.52
PPP1R3F-202ENST00000376188 NMD3Q96D46 503 aaKnown RBP18.32■□□□□ 0.52
PPP1R3F-202ENST00000376188 HHIPQ96QV1 700 aa18.32■□□□□ 0.52
PPP1R3F-202ENST00000376188 NTN4Q9HB63 628 aa18.32■□□□□ 0.52
PPP1R3F-202ENST00000376188 LIMD1Q9UGP4 676 aa18.32■□□□□ 0.52
PPP1R3F-202ENST00000376188 A0A087WXM4 84 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 TMEM202A6NGA9 273 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 H0YAE9 185 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 PRMT3O60678 531 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 BMP10O95393 424 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 TACR1P25103 407 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 ALDH3B2P48448 385 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 ABRQ12979 859 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 GTDC1Q4AE62 458 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 NOXRED1Q6NXP6 359 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 ABRAXAS1Q6UWZ7 409 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 GCNT7Q6ZNI0 430 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 THOC6Q86W42 341 aaKnown RBP18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 CALHM3Q86XJ0 350 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 KLHDC8AQ8IYD2 350 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 ALDH16A1Q8IZ83 802 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 FAM120BQ96EK7 910 aaKnown RBP18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 CCM2Q9BSQ5 444 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 TBCDQ9BTW9 1192 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 MRPS23Q9Y3D9 190 aaKnown RBP18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 KRT87PA6NCN2 255 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 WNT9AO14904 365 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 ADH1CP00326 375 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 PRPS1L1P21108 318 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 ALDH3A2P51648 485 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 CTSCP53634 463 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 TMEM115Q12893 351 aaPredicted RBP18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 CBX2Q14781 532 aaPredicted RBP18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 XKR6Q5GH73 641 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 B3GNT6Q6ZMB0 384 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 PARS2Q7L3T8 475 aaKnown RBP18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 GPR149Q86SP6 731 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 KIAA1958Q8N8K9 716 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 FBXO30Q8TB52 745 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 TMBIM1Q969X1 311 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 FAM8A1Q9UBU6 413 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 PPT2Q9UMR5 302 aa18.31■□□□□ 0.52
PPP1R3F-202ENST00000376188 SLC5A10A0PJK1 596 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 UPK1AO00322 258 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 CLGNO14967 610 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 HOXC11O43248 304 aaPredicted RBP18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 POU2F2P09086 479 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 HOXB9P17482 250 aaPredicted RBP18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 IRS1P35568 1242 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 HNF4AP41235 474 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 MTHFRP42898 656 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 KIR3DL1P43629 444 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 ARSFP54793 590 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 DYNC1I2Q13409 638 aaKnown RBP18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 PGS1Q32NB8 556 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 POM121L1PQ3SYA9 428 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 TMEM214Q6NUQ4 689 aaKnown RBP18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 AGTRAPQ6RW13 159 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 SDCCAG3Q96C92 435 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 SLC47A1Q96FL8 570 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 METTL2AQ96IZ6 378 aaKnown RBP18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 FOPNLQ96NB1 174 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 SLC6A13Q9NSD5 602 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 STOX2Q9P2F5 926 aaPredicted RBP18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 DNAJB9Q9UBS3 223 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 DPP7Q9UHL4 492 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 SLC27A6Q9Y2P4 619 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 TRIM64A6NGJ6 449 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 TRIM64CA6NLI5 447 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 H0Y858 1186 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 PER2O15055 1255 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 ALBP02768 609 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 PRNPP04156 253 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 HSD3B1P14060 373 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 HSD3B2P26439 372 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 PCDH1Q08174 1060 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 ABHD18Q0P651 414 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 MTAPQ13126 283 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 DAG1Q14118 895 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 GRIN2CQ14957 1233 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 ZNF697Q5TEC3 545 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 ENPP6Q6UWR7 440 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 USP51Q70EK9 711 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 PHACTR4Q8IZ21 702 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 WDR20Q8TBZ3 569 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 NELL1Q92832 810 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 NCLNQ969V3 563 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 FBXL20Q96IG2 436 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 EPHX3Q9H6B9 360 aa18.3■□□□□ 0.52
PPP1R3F-202ENST00000376188 MAGIXQ9H6Y5 334 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms