RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 TUSC3Q13454 348 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 LGI4Q8N135 537 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 SIDT2Q8NBJ9 832 aaKnown RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 SLC22A17Q8WUG5 538 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 CNTN3Q9P232 1028 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 GMFGO60234 142 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 ABCB7O75027 752 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 GADD45AP24522 165 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 RGS19P49795 217 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 MECP2P51608 486 aaKnown RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 C1QTNF8P60827 252 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 GANABQ14697 944 aaKnown RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 CYP17A1P05093 508 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 CCR8P51685 355 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 DACT2Q5SW24 774 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 SH3PXD2AQ5TCZ1 1133 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 SLCO2A1Q92959 643 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 ZSCAN5AQ9BUG6 496 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 FFAR2O15552 330 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 POP4O95707 220 aaKnown RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 H1F0P07305 194 aaKnown RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 PDE12Q6L8Q7 609 aaKnown RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 TMEM110Q86TL2 294 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 HSPBAP1Q96EW2 488 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 TMED9Q9BVK6 235 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 UBQLN2Q9UHD9 624 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 NCBP2P52298 156 aaKnown RBP eCLIP9.62□□□□□ -0.871e-7■■□□□ 13.3
SPEN-201ENST00000375759 UGCGQ16739 394 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 VGLL2Q8N8G2 317 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 AKT1S1Q96B36 256 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 LPIN3Q9BQK8 851 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 PPM1HQ9ULR3 514 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 KIDINS220Q9ULH0 1771 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 OR2AG2A6NM03 316 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 TACR2P21452 398 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 VARSP26640 1264 aaKnown RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 ZNF181Q2M3W8 571 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 SPATA22Q8NHS9 363 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 PLD4Q96BZ4 506 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 EBF4Q9BQW3 602 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 FZD10Q9ULW2 581 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 ERVW-1Q9UQF0 538 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 NOP16Q9Y3C1 178 aaKnown RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 CDH10Q9Y6N8 788 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 MYPNQ86TC9 1320 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 CLIC1O00299 241 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 INMTO95050 263 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 CASP9P55211 416 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 SH3D19Q5HYK7 790 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 SDHAF4Q5VUM1 108 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 TMBIM1Q969X1 311 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 SCP2D1Q9UJQ7 156 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 B4GALT5O43286 388 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 PCDH7O60245 1069 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 ALAS2P22557 587 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 RYKP34925 604 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 RPP38P78345 283 aaKnown RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 TBC1D25Q3MII6 688 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 FAM129CQ86XR2 697 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 CPA6Q8N4T0 437 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 HMCESQ96FZ2 354 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 FEM1CQ96JP0 617 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 MTERF1Q99551 399 aaKnown RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 OR2B2Q9GZK3 357 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 MAF1Q9H063 256 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 ZNF700Q9H0M5 742 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 ZBTB26Q9HCK0 441 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 ZDHHC4Q9NPG8 344 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 HCN3Q9P1Z3 774 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 RNF225M0QZC1 329 aaPredicted RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 M0R233 179 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 PCCBP05166 539 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 MTHFD1P11586 935 aaKnown RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 TAS2R43P59537 309 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 RPA4Q13156 261 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 SLC13A2Q13183 592 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 HNRNPDQ14103 355 aaKnown RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 C2orf73Q8N5S3 287 aaPredicted RBP9.62□□□□□ -0.87
SPEN-201ENST00000375759 OSTF1Q92882 214 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 COL21A1Q96P44 957 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 RAB11FIP5Q9BXF6 653 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 RNF6Q9Y252 685 aa9.62□□□□□ -0.87
SPEN-201ENST00000375759 SLITRK5O94991 958 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 CSN2P05814 226 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 AHCYP23526 432 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 SYT16Q17RD7 645 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 C9orf131Q5VYM1 1079 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 GPR151Q8TDV0 419 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 HAPLN3Q96S86 360 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 TTYH3Q9C0H2 523 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 NEUROD4Q9HD90 331 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 COL3A1P02461 1466 aaPredicted RBP9.61□□□□□ -0.87
SPEN-201ENST00000375759 HSD11B1P28845 292 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 RFTN1Q14699 578 aaPredicted RBP9.61□□□□□ -0.87
SPEN-201ENST00000375759 ANKDD1AQ495B1 522 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 KIAA1161Q6NSJ0 714 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 PROKR2Q8NFJ6 384 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 CANT1Q8WVQ1 401 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 MMP27Q9H306 513 aa9.61□□□□□ -0.87
SPEN-201ENST00000375759 RCBTB2O95199 551 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms