RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TUBA1BP68363 451 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 NRG1Q02297 640 aaPredicted RBP12.6□□□□□ -0.39
MSH5-204ENST00000375755 PWP1Q13610 501 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 PTPRCAPQ14761 206 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ZFP69Q49AA0 526 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ZNF544Q6NX49 715 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 CNKSR3Q6P9H4 555 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 TUBA1AQ71U36 451 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 FBXO39Q8N4B4 442 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 SETD9Q8NE22 299 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 OR10Q1Q8NGQ4 319 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 HCAR2Q8TDS4 363 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 FAM162AQ96A26 154 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 DEPDC7Q96QD5 511 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 SMIM14Q96QK8 99 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 TBCDQ9BTW9 1192 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 CDADC1Q9BWV3 514 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 WASH4PA8MWX3 477 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 SLC7A4O43246 635 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 FAM20BO75063 409 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 SLC2A3P11169 496 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 UGT2B10P36537 528 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ZXDBP98169 803 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ZNF33AQ06730 810 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ANKS6Q68DC2 871 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 KDELC1Q6UW63 502 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 C16orf59Q7L2K0 433 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 DET1Q7L5Y6 550 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 GALNT12Q8IXK2 581 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 UBQLNLQ8IYU4 475 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 SLC38A4Q969I6 547 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 PDLIM5Q96HC4 596 aaKnown RBP12.6□□□□□ -0.39
MSH5-204ENST00000375755 MED30Q96HR3 178 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ST6GAL2Q96JF0 529 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 EGLN2Q96KS0 407 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 SP110Q9HB58 689 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 PCDHGB6Q9Y5F9 930 aa12.6□□□□□ -0.39
MSH5-204ENST00000375755 ARNTLO00327 626 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 CRYZL1O95825 349 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 GADD45AP24522 165 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 SERPINH1P50454 418 aaKnown RBP12.59□□□□□ -0.39
MSH5-204ENST00000375755 ZNF45Q02386 682 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 MVKQ03426 396 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 PRKCDQ05655 676 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 RFX4Q33E94 735 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 GALNT7Q86SF2 657 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 PEX5LQ8IYB4 626 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 RHEBL1Q8TAI7 183 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 SUN5Q8TC36 379 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 UBE2FQ969M7 185 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 ZNF689Q96CS4 500 aaPredicted RBP12.59□□□□□ -0.39
MSH5-204ENST00000375755 EXOC2Q96KP1 924 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 MFSD1Q9H3U5 465 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 LOC105371267A0A1B0GV96 52 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 GRXCR2A6NFK2 248 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 DRGXA6NNA5 263 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 EVPLLA8MZ36 301 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 RPS17P08708 135 aaKnown RBP12.59□□□□□ -0.39
MSH5-204ENST00000375755 CLTBP09497 229 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 PIRTP0C851 137 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 G6PDP11413 515 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 KRT20P35900 424 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 ATP5C1P36542 298 aaKnown RBP12.59□□□□□ -0.39
MSH5-204ENST00000375755 CXCR4P61073 352 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 TWF1Q12792 350 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 PON2Q15165 354 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.59□□□□□ -0.39
MSH5-204ENST00000375755 Q6ZSR9 355 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 AHSA2Q719I0 299 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 C11orf74Q86VG3 221 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 AADATQ8N5Z0 425 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 ZNF461Q8TAF7 563 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 ESAMQ96AP7 390 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 ZBED2Q9BTP6 218 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 THUMPD3Q9BV44 507 aaKnown RBP12.59□□□□□ -0.39
MSH5-204ENST00000375755 TTLL2Q9BWV7 592 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 NUSAP1Q9BXS6 441 aaKnown RBP12.59□□□□□ -0.39
MSH5-204ENST00000375755 NXF2Q9GZY0 626 aaKnown RBP12.59□□□□□ -0.39
MSH5-204ENST00000375755 TFB2MQ9H5Q4 396 aaKnown RBP12.59□□□□□ -0.39
MSH5-204ENST00000375755 RNF167Q9H6Y7 350 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 NPAP1Q9NZP6 1156 aa12.59□□□□□ -0.39
MSH5-204ENST00000375755 CRNNQ9UBG3 495 aaPredicted RBP12.59□□□□□ -0.39
MSH5-204ENST00000375755 A0A0U1RQS6 177 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 NCF1BA6NI72 391 aaPredicted RBP12.58□□□□□ -0.39
MSH5-204ENST00000375755 CENPXA8MT69 81 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 NCF1CA8MVU1 366 aaPredicted RBP12.58□□□□□ -0.39
MSH5-204ENST00000375755 CXCR6O00574 342 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 ICMTO60725 284 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 RAMP2O60895 175 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 DNTTP04053 509 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 SOD2P04179 222 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 UROSP10746 265 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 NCF1P14598 390 aaPredicted RBP12.58□□□□□ -0.39
MSH5-204ENST00000375755 EPHA2P29317 976 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 P2RX3P56373 397 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 SOWAHCQ53LP3 525 aaPredicted RBP12.58□□□□□ -0.39
MSH5-204ENST00000375755 CEP78Q5JTW2 689 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 MARC1Q5VT66 337 aa12.58□□□□□ -0.39
MSH5-204ENST00000375755 CAPN13Q6MZZ7 669 aaPredicted RBP12.58□□□□□ -0.39
MSH5-204ENST00000375755 DEPDC4Q8N2C3 294 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms