RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 LGI4Q8N135 537 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 FRS2Q8WU20 508 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 BRI3BPQ8WY22 251 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 VMP1Q96GC9 406 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 C3orf30Q96M34 536 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 ZBTB20Q9HC78 741 aaPredicted RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 IMP3Q9NV31 184 aaKnown RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 MTMR10Q9NXD2 777 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 GJD2Q9UKL4 321 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 PEX16Q9Y5Y5 336 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 RBBP6Q7Z6E9 1792 aaKnown RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 MYADML2A6NDP7 307 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 PLK4O00444 970 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 ADAMDEC1O15204 470 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 KDELR3O43731 214 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 OR5F1O95221 314 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 C8GP07360 202 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 GRB14Q14449 540 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 IFI44LQ53G44 452 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 SPRYD7Q5W111 196 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 TMEM220Q6QAJ8 160 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 IPCEF1Q8WWN9 437 aaPredicted RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 UBE2E3Q969T4 207 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 NARS2Q96I59 477 aaKnown RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 TRNT1Q96Q11 434 aaKnown RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 INPP5KQ9BT40 448 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 MAF1Q9H063 256 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 MAGED1Q9Y5V3 778 aaPredicted RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 HAS3O00219 553 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 SEC13P55735 322 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 MEF2AQ02078 507 aaPredicted RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 CSTF1Q05048 431 aaKnown RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 BLOC1S3Q6QNY0 202 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 HS3ST5Q8IZT8 346 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 VRTNQ9H8Y1 702 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 FARSBQ9NSD9 589 aaKnown RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 COMMD3Q9UBI1 195 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 DNAJC15Q9Y5T4 150 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 CFAP20Q9Y6A4 193 aaKnown RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 KLHL33A6NCF5 533 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 VILLO15195 856 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 SERPINB7O75635 380 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 C6orf47O95873 294 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 TGFB1P01137 390 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 KLK1P06870 262 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 KCNA5P22460 613 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 CRTC2Q53ET0 693 aaPredicted RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 LRRC66Q68CR7 880 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 NCCRP1Q6ZVX7 275 aaPredicted RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 PIK3R3Q92569 461 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 PPP1R16AQ96I34 528 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 CD244Q9BZW8 370 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 RSPH9Q9H1X1 276 aaPredicted RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 TRIT1Q9H3H1 467 aaKnown RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 UCKL1Q9NWZ5 548 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 PHF24Q9UPV7 400 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 DHRS7Q9Y394 339 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 TLR4O00206 839 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 OR1F1O43749 312 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 SNX4O95219 450 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 DNAJB1P25685 340 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 XKP51811 444 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 MPPE1Q53F39 396 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 RNF130Q86XS8 419 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 FAM217AQ8IXS0 508 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 OR52B6Q8NGF0 335 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 DNAJC27Q9NZQ0 273 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 RIMS3Q9UJD0 308 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 TAF1LQ8IZX4 1826 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 ZW10O43264 779 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 NME6O75414 186 aaPredicted RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 C8BP07358 591 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 PPIBP23284 216 aaKnown RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 RPL4P36578 427 aaKnown RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 ASMTP46597 345 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 MAPK12P53778 367 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 YBEYP58557 167 aaPredicted RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 UAP1L1Q3KQV9 507 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 THOC6Q86W42 341 aaKnown RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 COMMD2Q86X83 199 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 ING3Q9NXR8 418 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 KCNE2Q9Y6J6 123 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 GSAPA4D1B5 854 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 H3BM21 787 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 PPP6CO00743 305 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 ACADMP11310 421 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 GJA1P17302 382 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 PRKCZQ05513 592 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 SLC9A5Q14940 896 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 IQCCQ4KMZ1 466 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 TXNDC8Q6A555 127 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 MACC1Q6ZN28 852 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 ADGRG6Q86SQ4 1221 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 OR8H3Q8N146 312 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 C1orf52Q8N6N3 182 aaKnown RBP6.38□□□□□ -1.39
SMC1A-202ENST00000375340 FAIM2Q9BWQ8 316 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 OSBPL10Q9BXB5 764 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 GULP1Q9UBP9 304 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 ABHD14A-ACY1A0A1B0GW23 586 aa6.38□□□□□ -1.39
SMC1A-202ENST00000375340 GNB5O14775 395 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms