RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 MTFMTQ96DP5 389 aaKnown RBP10.81□□□□□ -0.68
CCDC40-203ENST00000374877 TRIB3Q96RU7 358 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 MAGIXQ9H6Y5 334 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 KLHL3Q9UH77 587 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 TNPO3Q9Y5L0 923 aaKnown RBP10.81□□□□□ -0.68
CCDC40-203ENST00000374877 DOCK4Q8N1I0 1966 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 NUP214P35658 2090 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-203ENST00000374877 PER2O15055 1255 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 RFPL2O75678 378 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 B3GALT4O96024 378 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 IL6P05231 212 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 JUNDP17535 347 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 TRPC1P48995 793 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 TAF1AQ15573 450 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-203ENST00000374877 ZNF404Q494X3 552 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 CTXN3Q4LDR2 81 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 C10orf120Q5SQS8 335 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 GALNT10Q86SR1 603 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 CCDC103Q8IW40 242 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 ATG16L2Q8NAA4 619 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 FBLIM1Q8WUP2 373 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 IGSF21Q96ID5 467 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 ZNF558Q96NG5 402 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 TTPALQ9BTX7 342 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 CINPQ9BW66 212 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-203ENST00000374877 PDP1Q9P0J1 537 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-203ENST00000374877 HCSTQ9UBK5 93 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 RIMKLBQ9ULI2 386 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 PCDHGC4Q9Y5F7 938 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 BACE2Q9Y5Z0 518 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 IGLV3-10A0A075B6K4 115 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 STX7O15400 261 aaKnown RBP10.81□□□□□ -0.68
CCDC40-203ENST00000374877 FFAR2O15552 330 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 TLR5O60602 858 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 FGBP02675 491 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 NTRK1P04629 796 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 LPOP22079 712 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-203ENST00000374877 KRT20P35900 424 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 PLEKHG6Q3KR16 790 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 THOC7Q6I9Y2 204 aaKnown RBP10.81□□□□□ -0.68
CCDC40-203ENST00000374877 SUSD1Q6UWL2 747 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 NEK10Q6ZWH5 1172 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 GPR65Q8IYL9 337 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 SLC39A11Q8N1S5 342 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 FAM83FQ8NEG4 500 aaPredicted RBP10.81□□□□□ -0.68
CCDC40-203ENST00000374877 NDEL1Q9GZM8 345 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 SP140LQ9H930 580 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 MARCH2Q9P0N8 246 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 OSGIN1Q9UJX0 560 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 ANKRD36A6QL64 1941 aa10.81□□□□□ -0.68
CCDC40-203ENST00000374877 FAM47E-STBD1D6RA91 191 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 AIREO43918 545 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 NUAK1O60285 661 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 ULK1O75385 1050 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 KCNK2O95069 426 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 EIF2S1P05198 315 aaKnown RBP10.8□□□□□ -0.68
CCDC40-203ENST00000374877 ACRP10323 421 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 ALOX12P18054 663 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 GNPDA1P46926 289 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 PCBP2Q15366 365 aaKnown RBP eCLIP10.8□□□□□ -0.685e-7■■■■■ 29.1
CCDC40-203ENST00000374877 OR2T5Q6IEZ7 315 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 CAPN13Q6MZZ7 669 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-203ENST00000374877 HORMAD1Q86X24 394 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 CHPFQ8IZ52 775 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 SLC22A15Q8IZD6 547 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 OR2T29Q8NH02 315 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 BCL7CQ8WUZ0 217 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-203ENST00000374877 PROX1Q92786 737 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 KCNJ9Q92806 393 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 TXNDC15Q96J42 360 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 LRTM1Q9HBL6 345 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 CCNB1IP1Q9NPC3 277 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 ZNF490Q9ULM2 529 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-203ENST00000374877 PCDHB5Q9Y5E4 795 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 A6NL46 340 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 FAM220BPB1ANY3 271 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 RAD51BO15315 384 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 SPNP16150 400 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 YBEYP58557 167 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-203ENST00000374877 HTRA4P83105 476 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-203ENST00000374877 MVKQ03426 396 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 MAD2L1Q13257 205 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-203ENST00000374877 MAD2L1BPQ15013 274 aaPredicted RBP10.8□□□□□ -0.68
CCDC40-203ENST00000374877 LRIT3Q3SXY7 679 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 ATG9BQ674R7 924 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 C16orf59Q7L2K0 433 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 ADAMTSL2Q86TH1 951 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 ULK4Q96C45 1275 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 C8orf48Q96LL4 319 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 INPP5KQ9BT40 448 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 OPTCQ9UBM4 332 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 SCML2Q9UQR0 700 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 IFT52Q9Y366 437 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 ISPDA4D126 451 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 TGFBR2P37173 567 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 CDC20Q12834 499 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 GPR17Q13304 367 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 KEAP1Q14145 624 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 DESI1Q6ICB0 168 aa10.8□□□□□ -0.68
CCDC40-203ENST00000374877 RNF19BQ6ZMZ0 732 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms