RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 SLC34A3Q8N130 599 aa10.36□□□□□ -0.75
PGK1-201ENST00000373316 LINC01465Q8N7H1 131 aa10.36□□□□□ -0.75
PGK1-201ENST00000373316 PIWIL1Q96J94 861 aaKnown RBP10.36□□□□□ -0.75
PGK1-201ENST00000373316 COPS4Q9BT78 406 aa10.36□□□□□ -0.75
PGK1-201ENST00000373316 CEP290O15078 2479 aa10.36□□□□□ -0.75
PGK1-201ENST00000373316 ARHGEF33A8MVX0 844 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 CASKO14936 926 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 SLC25A12O75746 678 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 SLC35G6P0C7Q6 338 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 NUMBP49757 651 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 CCR8P51685 355 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 NAE1Q13564 534 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 FAM174BQ3ZCQ3 159 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 SYPL2Q5VXT5 272 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 LCN8Q6JVE9 175 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 RPL13AP3Q6NVV1 102 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 SPATA6LQ8N4H0 392 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 SMYD1Q8NB12 490 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 SLC43A3Q8NBI5 491 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 OR2AP1Q8NGE2 309 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 OR10A6Q8NH74 314 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 SNIP1Q8TAD8 396 aaKnown RBP10.35□□□□□ -0.75
PGK1-201ENST00000373316 PEBP4Q96S96 227 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 TCF25Q9BQ70 676 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 CD244Q9BZW8 370 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 CYTH4Q9UIA0 394 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 ZDHHC2Q9UIJ5 367 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 TMEM5Q9Y2B1 443 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 TRPM7Q96QT4 1865 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 ANKRD66B4E2M5 251 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 PDLIM1O00151 329 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 BUD23O43709 281 aaKnown RBP10.35□□□□□ -0.75
PGK1-201ENST00000373316 OXSR1O95747 527 aaPredicted RBP10.35□□□□□ -0.75
PGK1-201ENST00000373316 CYBAP13498 195 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 MS4A13Q5J8X5 152 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 METTL25Q8N6Q8 603 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 SMOQ99835 787 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 MMP27Q9H306 513 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 ARMC1Q9NVT9 282 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 LYARQ9NX58 379 aaKnown RBP10.35□□□□□ -0.75
PGK1-201ENST00000373316 CMTM6Q9NX76 183 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 NME7Q9Y5B8 376 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 SNX10Q9Y5X0 201 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 STON1Q9Y6Q2 735 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 M0QX08 132 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 FGF4P08620 206 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 ATP5A1P25705 553 aaKnown RBP10.35□□□□□ -0.75
PGK1-201ENST00000373316 BLVRAP53004 296 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 PDE12Q6L8Q7 609 aaKnown RBP10.35□□□□□ -0.75
PGK1-201ENST00000373316 KLHDC10Q6PID8 442 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 GDPD4Q6W3E5 623 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 ZNF367Q7RTV3 350 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 MRPL10Q7Z7H8 261 aaKnown RBP10.35□□□□□ -0.75
PGK1-201ENST00000373316 ZFAND4Q86XD8 727 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 NETO2Q8NC67 525 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 RGMAQ96B86 450 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 SLC22A4Q9H015 551 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 UBAP1Q9NZ09 502 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 HSFX1Q9UBD0 423 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 ZNHIT2Q9UHR6 403 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 TIMM22Q9Y584 194 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 CLDN4O14493 209 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 UGDHO60701 494 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 FDXRP22570 491 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 S100GP29377 79 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 TM4SF4P48230 202 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 IRF9Q00978 393 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 SNAPC1Q16533 368 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 BORAQ6PGQ7 559 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 DET1Q7L5Y6 550 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 SATL1Q86VE3 508 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 NRSN1Q8IZ57 195 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 SMG8Q8ND04 991 aaKnown RBP10.35□□□□□ -0.75
PGK1-201ENST00000373316 GPR156Q8NFN8 814 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 OR7D4Q8NG98 312 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 RAB7BQ96AH8 199 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 AHCYL2Q96HN2 611 aaKnown RBP10.35□□□□□ -0.75
PGK1-201ENST00000373316 MRPL39Q9NYK5 338 aaKnown RBP10.35□□□□□ -0.75
PGK1-201ENST00000373316 HCSTQ9UBK5 93 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 COQ6Q9Y2Z9 468 aa10.35□□□□□ -0.75
PGK1-201ENST00000373316 ARVCFO00192 962 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 NOBOXO60393 691 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 ZNF37AP17032 561 aaPredicted RBP10.34□□□□□ -0.75
PGK1-201ENST00000373316 XRCC1P18887 633 aaPredicted RBP10.34□□□□□ -0.75
PGK1-201ENST00000373316 RPP38P78345 283 aaKnown RBP10.34□□□□□ -0.75
PGK1-201ENST00000373316 SCARB2Q14108 478 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 ZFP69Q49AA0 526 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 C9orf64Q5T6V5 341 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 TXNRD3NBQ6F5E7 133 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 PM20D1Q6GTS8 502 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 RTL4Q6ZR62 310 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 SLITRK4Q8IW52 837 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 POMGNT2Q8NAT1 580 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 NACC2Q96BF6 587 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 ZNF570Q96NI8 536 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 OR52B2Q96RD2 323 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 RNF208Q9H0X6 261 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 EXOSC1Q9Y3B2 195 aaKnown RBP10.34□□□□□ -0.75
PGK1-201ENST00000373316 BACE2Q9Y5Z0 518 aa10.34□□□□□ -0.75
PGK1-201ENST00000373316 SPTLC1O15269 473 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms