RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 C9orf16Q9BUW7 83 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 OSBPL11Q9BXB4 747 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 ING2Q9H160 280 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 SLC32A1Q9H598 525 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 C1orf109Q9NX04 203 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 PTBP2Q9UKA9 531 aaKnown RBP16.62■□□□□ 0.25
VEGFA-205ENST00000372067 ERVW-1Q9UQF0 538 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 ERGIC3Q9Y282 383 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 AQP12BA6NM10 295 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 SOCS2O14508 198 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 GAPDHSO14556 408 aaPredicted RBP16.62■□□□□ 0.25
VEGFA-205ENST00000372067 DOK6Q6PKX4 331 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 TRMT11Q7Z4G4 463 aaKnown RBP16.62■□□□□ 0.25
VEGFA-205ENST00000372067 AQP12AQ8IXF9 295 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 PHACTR4Q8IZ21 702 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 FOXJ1Q92949 421 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 LRRC3Q9BY71 257 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 SLC2A11Q9BYW1 496 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 SOX17Q9H6I2 414 aaPredicted RBP16.62■□□□□ 0.25
VEGFA-205ENST00000372067 DUS2Q9NX74 493 aaKnown RBP16.62■□□□□ 0.25
VEGFA-205ENST00000372067 TBC1D14Q9P2M4 693 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 HCFC2Q9Y5Z7 792 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 C7orf72A4D263 438 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 EEDO75530 441 aaKnown RBP16.62■□□□□ 0.25
VEGFA-205ENST00000372067 OLFM2O95897 454 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 C1SP09871 688 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 VIPR2P41587 438 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 DGKGP49619 791 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 CDH15P55291 814 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 BNIP3Q12983 259 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 SELPLGQ14242 412 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 ZFAND4Q86XD8 727 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 SYT12Q8IV01 421 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 VRK3Q8IV63 474 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 KIAA2013Q8IYS2 634 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 C2orf73Q8N5S3 287 aaPredicted RBP16.62■□□□□ 0.25
VEGFA-205ENST00000372067 ASZ1Q8WWH4 475 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 SLCO4A1Q96BD0 722 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 BIRC7Q96CA5 298 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 CHID1Q9BWS9 393 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 DNAJC11Q9NVH1 559 aa16.62■□□□□ 0.25
VEGFA-205ENST00000372067 TCRBV3S1A0A5B6 114 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 EI24O14681 340 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 ZNF682O95780 498 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 GTDC1Q4AE62 458 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 FAM98BQ52LJ0 330 aaKnown RBP16.61■□□□□ 0.25
VEGFA-205ENST00000372067 FGD3Q5JSP0 725 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 HAUS8Q9BT25 410 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 KLHL25Q9H0H3 589 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 PLK4O00444 970 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 PDYNP01213 254 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 IRS1P35568 1242 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 PLCL1Q15111 1095 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 RGS21Q2M5E4 152 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 XKR7Q5GH72 579 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 CRTC3Q6UUV7 619 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 PDPRQ8NCN5 879 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 SMG7Q92540 1137 aaKnown RBP16.61■□□□□ 0.25
VEGFA-205ENST00000372067 MED30Q96HR3 178 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 IL23AQ9NPF7 189 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 BAG5Q9UL15 447 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 NUP214P35658 2090 aaPredicted RBP16.61■□□□□ 0.25
VEGFA-205ENST00000372067 CARNS1A5YM72 827 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 KLK8O60259 260 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 MYO1DO94832 1006 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 ALBP02768 609 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 ANXA6P08133 673 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 FCGR1AP12314 374 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 TUBA1BP68363 451 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 ITGADQ13349 1161 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 RAET1GQ6H3X3 334 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 TMEM220Q6QAJ8 160 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 ZNF621Q6ZSS3 439 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 TUBA1AQ71U36 451 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 CLVS1Q8IUQ0 354 aaPredicted RBP16.61■□□□□ 0.25
VEGFA-205ENST00000372067 PNPT1Q8TCS8 783 aaKnown RBP16.61■□□□□ 0.25
VEGFA-205ENST00000372067 PDLIM5Q96HC4 596 aaKnown RBP16.61■□□□□ 0.25
VEGFA-205ENST00000372067 ZSWIM3Q96MP5 696 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 CCM2LQ9NUG4 571 aaPredicted RBP16.61■□□□□ 0.25
VEGFA-205ENST00000372067 ADGRE2Q9UHX3 823 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 MYRFQ9Y2G1 1151 aa16.61■□□□□ 0.25
VEGFA-205ENST00000372067 A0A1W2PPW3 197 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 IFRD1O00458 451 aaPredicted RBP16.6■□□□□ 0.25
VEGFA-205ENST00000372067 CRYZL1O95825 349 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 RPS14P62263 151 aaKnown RBP16.6■□□□□ 0.25
VEGFA-205ENST00000372067 GTF2H3Q13889 308 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 TTC23LQ6PF05 361 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 CLIP4Q8N3C7 705 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 OR2A12Q8NGT7 310 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 CENPNQ96H22 339 aaPredicted RBP16.6■□□□□ 0.25
VEGFA-205ENST00000372067 SARDHQ9UL12 918 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 ANKRD36A6QL64 1941 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 SH3BP5O60239 455 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 FTH1P02794 183 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 CATP04040 527 aaKnown RBP16.6■□□□□ 0.25
VEGFA-205ENST00000372067 EBLN1P0CF75 366 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 HSD17B1P14061 328 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 VIPR1P32241 457 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 BDKRB1P46663 353 aa16.6■□□□□ 0.25
VEGFA-205ENST00000372067 EEFSECP57772 596 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms