RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 CCR10P46092 362 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 TRIM25Q14258 630 aaKnown RBP14.37□□□□□ -0.11
NDC1-201ENST00000371429 SUSD1Q6UWL2 747 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 ATCAYQ86WG3 371 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 ARL10Q8N8L6 244 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 FAM81AQ8TBF8 368 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 CIB1Q99828 191 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 YIPF4Q9BSR8 244 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 MOCS1Q9NZB8 636 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 PHF11Q9UIL8 331 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 TESMINQ9Y4I5 508 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 TEX264Q9Y6I9 313 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 TPST2O60704 377 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 C1orf61Q13536 156 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 GALNT7Q86SF2 657 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 SLC39A11Q8N1S5 342 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 SNRNP27Q8WVK2 155 aaKnown RBP14.37□□□□□ -0.11
NDC1-201ENST00000371429 SLC29A3Q9BZD2 475 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 DERL2Q9GZP9 239 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 SAGE1Q9NXZ1 904 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 IFT80Q9P2H3 777 aaPredicted RBP14.37□□□□□ -0.11
NDC1-201ENST00000371429 FADS3Q9Y5Q0 445 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 CXCR6O00574 342 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 TULP3O75386 442 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 MTPNP58546 118 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 RAB14P61106 215 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 TMPRSS11AQ6ZMR5 421 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 TMEM25Q86YD3 366 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 TMEM126BQ8IUX1 230 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 WDTC1Q8N5D0 677 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 ZNF784Q8NCA9 323 aaPredicted RBP14.37□□□□□ -0.11
NDC1-201ENST00000371429 KBTBD8Q8NFY9 601 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 NSMCE3Q96MG7 304 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 RBM4BQ9BQ04 359 aaKnown RBP14.37□□□□□ -0.11
NDC1-201ENST00000371429 RBM4Q9BWF3 364 aaKnown RBP14.37□□□□□ -0.11
NDC1-201ENST00000371429 EHD3Q9NZN3 535 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 FAM221BA6H8Z2 402 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 A8MUI8 341 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 ZBTB22O15209 634 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 DBTP11182 482 aaKnown RBP14.37□□□□□ -0.11
NDC1-201ENST00000371429 SP140Q13342 867 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 PON2Q15165 354 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 ZSWIM7Q19AV6 140 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 FBXO43Q4G163 708 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 C15orf39Q6ZRI6 1047 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 IMP4Q96G21 291 aaKnown RBP14.37□□□□□ -0.11
NDC1-201ENST00000371429 MRPS26Q9BYN8 205 aaKnown RBP14.37□□□□□ -0.11
NDC1-201ENST00000371429 STRADBQ9C0K7 418 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 MCCC2Q9HCC0 563 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 IL1RAPQ9NPH3 570 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 PDLIM7Q9NR12 457 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 ARHGEF3Q9NR81 526 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 MRPL39Q9NYK5 338 aaKnown RBP14.37□□□□□ -0.11
NDC1-201ENST00000371429 SSR3Q9UNL2 185 aa14.37□□□□□ -0.11
NDC1-201ENST00000371429 PRRC2BQ5JSZ5 2229 aaKnown RBP14.37□□□□□ -0.11
NDC1-201ENST00000371429 hCG_2039718K7EN88 272 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 CRYGNQ8WXF5 182 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 ART5Q96L15 291 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 FCRL4Q96PJ5 515 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 FIZ1Q96SL8 496 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 THUMPD1Q9NXG2 353 aaKnown RBP14.36□□□□□ -0.11
NDC1-201ENST00000371429 SPATA7Q9P0W8 599 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 CRNNQ9UBG3 495 aaPredicted RBP14.36□□□□□ -0.11
NDC1-201ENST00000371429 GON4LQ3T8J9 2241 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 AXIN1O15169 862 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 DLX3O60479 287 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 GPIP06744 558 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 PLGLB1Q02325 96 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 SLC30A6Q6NXT4 461 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 TTC9BQ8N6N2 239 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 PHOSPHO2Q8TCD6 241 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 CTPS2Q9NRF8 586 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 TMLHEQ9NVH6 421 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 UTS2RQ9UKP6 389 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 GNB5O14775 395 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 PLGP00747 810 aaPredicted RBP14.36□□□□□ -0.11
NDC1-201ENST00000371429 SLC26A3P40879 764 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 STAT5AP42229 794 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 FAM214AQ32MH5 1076 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 PLEKHS1Q5SXH7 462 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 BTN2A1Q7KYR7 527 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 HDDC2Q7Z4H3 204 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 LRRTM3Q86VH5 581 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 OR4F6Q8NGB9 312 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 KIAA1191Q96A73 305 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 GPER1Q99527 375 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 MRM3Q9HC36 420 aaKnown RBP14.36□□□□□ -0.11
NDC1-201ENST00000371429 SERINC1Q9NRX5 453 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 C19orf25Q9UFG5 118 aaPredicted RBP14.36□□□□□ -0.11
NDC1-201ENST00000371429 NUP188Q5SRE5 1749 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 CAPN14A8MX76 684 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 CST5P28325 142 aaPredicted RBP14.36□□□□□ -0.11
NDC1-201ENST00000371429 OMPP47874 163 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 DLG1Q12959 904 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 CST6Q15828 149 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 ZNF311Q5JNZ3 666 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 TRAM1L1Q8N609 369 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 FITM2Q8N6M3 262 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 ZNF527Q8NB42 609 aa14.36□□□□□ -0.11
NDC1-201ENST00000371429 ZDHHC12Q96GR4 267 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms