RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 DNAJB9Q9UBS3 223 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 PCDHGB1Q9Y5G3 927 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 COL1A2P08123 1366 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 EPHX1P07099 455 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 HK1P19367 917 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 CCKBRP32239 447 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 NFKB2Q00653 900 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 MERTKQ12866 999 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 ALG10BQ5I7T1 473 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 MTFR2Q6P444 385 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 DNAJB7Q7Z6W7 309 aaPredicted RBP12.2□□□□□ -0.46
HCFC1-202ENST00000369984 GLIS2Q9BZE0 524 aaPredicted RBP12.2□□□□□ -0.46
HCFC1-202ENST00000369984 WDR37Q9Y2I8 494 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 OR6C75A6NL08 312 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 SMAD9O15198 467 aaKnown RBP12.2□□□□□ -0.46
HCFC1-202ENST00000369984 FESP07332 822 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 PEPDP12955 493 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 HNRNPH3P31942 346 aaKnown RBP12.2□□□□□ -0.46
HCFC1-202ENST00000369984 OXR1Q8N573 874 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 LIN37Q96GY3 246 aaPredicted RBP12.2□□□□□ -0.46
HCFC1-202ENST00000369984 KREMEN1Q96MU8 473 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 SLC38A3Q99624 504 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 HTATIP2Q9BUP3 242 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 CADM1Q9BY67 442 aaKnown RBP12.2□□□□□ -0.46
HCFC1-202ENST00000369984 POLR2J3Q9H1A7 115 aaKnown RBP12.2□□□□□ -0.46
HCFC1-202ENST00000369984 MT-CYBP00156 380 aaPredicted RBP12.2□□□□□ -0.46
HCFC1-202ENST00000369984 PLA2G16P53816 162 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 ERVK-21P61565 698 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 HFE2Q6ZVN8 426 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 ZNF676Q8N7Q3 588 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 AZIN2Q96A70 460 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 C13orf42A0A1B0GVH6 325 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 SLC7A1P30825 629 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 ADRA1BP35368 520 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 OR12D2P58182 307 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 SLC3A1Q07837 685 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 VSTM1Q6UX27 236 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 GPR142Q7Z601 462 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 BPIFB1Q8TDL5 484 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 SLC35A5Q9BS91 424 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 SLC25A51Q9H1U9 297 aa12.2□□□□□ -0.46
HCFC1-202ENST00000369984 GNAZP19086 355 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 DNAJA1P31689 397 aaKnown RBP12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ATAD3CQ5T2N8 411 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 LCLAT1Q6UWP7 414 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 CYP2U1Q7Z449 544 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 POC1BQ8TC44 478 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 C15orf40Q8WUR7 153 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 C1orf109Q9NX04 203 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 TCRBV7S2A1N4TA0A589 114 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 FAM234BA2RU67 622 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ELOA3DA6NLF2 546 aaPredicted RBP12.19□□□□□ -0.46
HCFC1-202ENST00000369984 HERVK_113P63132 956 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 CLCA4Q14CN2 919 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 NPTX1Q15818 432 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ELOA3BQ3SY89 546 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ABHD13Q7L211 337 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ZNF101Q8IZC7 436 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ELOA3Q8NG57 546 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 BRSK1Q8TDC3 778 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 SLC13A3Q8WWT9 602 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ERVK-6Q9BXR3 956 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 DPAGT1Q9H3H5 408 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 POLR3BQ9NW08 1133 aaPredicted RBP12.19□□□□□ -0.46
HCFC1-202ENST00000369984 WASF2Q9Y6W5 498 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 A0A1W2PQ67 120 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 PCSK2P16519 638 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 NSG1P42857 185 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 CCR8P51685 355 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 MAP1SQ66K74 1059 aaPredicted RBP12.19□□□□□ -0.46
HCFC1-202ENST00000369984 PAQR7Q86WK9 346 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 MSANTD3Q96H12 275 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 BARD1Q99728 777 aaKnown RBP12.19□□□□□ -0.46
HCFC1-202ENST00000369984 PARPBPQ9NWS1 579 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 MEGF6O75095 1541 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ZNF726A6NNF4 738 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 SPATA31C1P0DKV0 1188 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 MAB21L1Q13394 359 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 TAF1AQ15573 450 aaPredicted RBP12.19□□□□□ -0.46
HCFC1-202ENST00000369984 CRTC1Q6UUV9 634 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 GPC2Q8N158 579 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ZNF709Q8N972 641 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 AUTS2Q8WXX7 1259 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 SRMSQ9H3Y6 488 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 PNO1Q9NRX1 252 aaKnown RBP12.19□□□□□ -0.46
HCFC1-202ENST00000369984 SLC39A1Q9NY26 324 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 ERVK-11Q9UQG0 969 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 FAM237AA0A1B0GTK4 181 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 LOC100130705A0A1B0GUX0 176 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 AIPO00170 330 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 EI24O14681 340 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 B4GALT4O60513 344 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 CDH1P12830 882 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 RAB15P59190 212 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 PDE12Q6L8Q7 609 aaKnown RBP12.19□□□□□ -0.46
HCFC1-202ENST00000369984 TMED4Q7Z7H5 227 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 CPNE9Q8IYJ1 553 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 DPEP2Q9H4A9 486 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 LGALS13Q9UHV8 139 aa12.19□□□□□ -0.46
HCFC1-202ENST00000369984 MATN3O15232 486 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms