RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 TTPALQ9BTX7 342 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 FAM83DQ9H4H8 585 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 PCDH7O60245 1069 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 GRIA2P42262 883 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 TCEA2Q15560 299 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 TBRG1Q3YBR2 411 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 ATXN7L2Q5T6C5 722 aaPredicted RBP15.56■□□□□ 0.08
COL17A1-202ENST00000369733 LINGO2Q7L985 606 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 SLC37A3Q8NCC5 494 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 GEMIN6Q8WXD5 167 aaKnown RBP15.56■□□□□ 0.08
COL17A1-202ENST00000369733 CAPN14A8MX76 684 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 GRM6O15303 877 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 SLC35E2BP0CK96 405 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 CTC1Q2NKJ3 1217 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 TECRLQ5HYJ1 363 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 FAM171BQ6P995 826 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 PIGKQ92643 395 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 PYCR2Q96C36 320 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 NPY6RQ99463 290 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 MAPKAP1Q9BPZ7 522 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 SLC35A5Q9BS91 424 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 IL1RAPQ9NPH3 570 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 ASAH2Q9NR71 780 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 THG1LQ9NWX6 298 aaKnown RBP15.56■□□□□ 0.08
COL17A1-202ENST00000369733 VPS29Q9UBQ0 182 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 NDOR1Q9UHB4 597 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 ZNF510Q9Y2H8 683 aa15.56■□□□□ 0.08
COL17A1-202ENST00000369733 A0A1W2PQ67 120 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 PLOD2O00469 737 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 XYLBO75191 536 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 LAMP2P13473 410 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 HTR1EP28566 365 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 CBLBQ13191 982 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 HACD2Q6Y1H2 254 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 DEFB132Q7Z7B7 95 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 ZDHHC7Q9NXF8 308 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 IKZF2Q9UKS7 526 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 NCKAP1Q9Y2A7 1128 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 NALCNQ8IZF0 1738 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 LCHNA4D1U4 455 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 MANBAO00462 879 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 STBD1O95210 358 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 RFC2P35250 354 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 SLC10A2Q12908 348 aaPredicted RBP15.55■□□□□ 0.08
COL17A1-202ENST00000369733 ZNF311Q5JNZ3 666 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 SMARCD3Q6STE5 483 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 MARCH9Q86YJ5 346 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 KLHL36Q8N4N3 616 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 RNASE11Q8TAA1 199 aaKnown RBP15.55■□□□□ 0.08
COL17A1-202ENST00000369733 CFAP97Q9P2B7 532 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 CRB2Q5IJ48 1285 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 SIAH1Q8IUQ4 282 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 SLC9A6Q92581 669 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 FUNDC2Q9BWH2 189 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 TMEM27Q9HBJ8 222 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 HSPB11Q9Y547 144 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 TMEM44Q2T9K0 475 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 FAM91A1Q658Y4 838 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 MIR1-1HGQ9H1L0 117 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 CTPS2Q9NRF8 586 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 CYTH4Q9UIA0 394 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 PADI3Q9ULW8 664 aa15.55■□□□□ 0.08
COL17A1-202ENST00000369733 PARP4Q9UKK3 1724 aaKnown RBP15.54■□□□□ 0.08
COL17A1-202ENST00000369733 A0A1W2PRB8 838 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 TBC1D3BA6NDS4 549 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 MANSC4A6NHS7 340 aaPredicted RBP15.54■□□□□ 0.08
COL17A1-202ENST00000369733 SLC9A3R1O14745 358 aaPredicted RBP15.54■□□□□ 0.08
COL17A1-202ENST00000369733 ARFIP1P53367 373 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 MS4A2Q01362 244 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 RTL4Q6ZR62 310 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 MINDY1Q8N5J2 469 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 OR14I1A6ND48 311 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 STC1P52823 247 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 FRRS1Q6ZNA5 592 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 PRR23CQ6ZRP0 262 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 SLC35G5Q96KT7 338 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 ZNF558Q96NG5 402 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 SEZ6LQ9BYH1 1024 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 SLC29A3Q9BZD2 475 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 SLC32A1Q9H598 525 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 TIGARQ9NQ88 270 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 ERVK-11Q9UQG0 969 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 PCDHB3Q9Y5E6 796 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 BAZ2AQ9UIF9 1905 aaKnown RBP15.54■□□□□ 0.08
COL17A1-202ENST00000369733 LOC730098B7Z3J9 87 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 C1QTNF3-AMACRE9PGA6 284 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 HAS3O00219 553 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 PGGT1BP53609 377 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 JAG1P78504 1218 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 ZNF33AQ06730 810 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 ZNF252P-AS1Q0IIN9 211 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 CFAP206Q8IYR0 622 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 RERGQ96A58 199 aaPredicted RBP15.54■□□□□ 0.08
COL17A1-202ENST00000369733 ITPKCQ96DU7 683 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 ANKRD60Q9BZ19 345 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 DAPL1A0PJW8 107 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 PDPK1O15530 556 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 PAPSS2O95340 614 aaPredicted RBP15.54■□□□□ 0.08
COL17A1-202ENST00000369733 TIGD5Q53EQ6 642 aa15.54■□□□□ 0.08
COL17A1-202ENST00000369733 KIAA1161Q6NSJ0 714 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms