RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 SKIV2L2P42285 1042 aaKnown RBP8.57□□□□□ -1.04
TPM3-213ENST00000368545 SPINT3P49223 89 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 SATB1Q01826 763 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 MESP2Q0VG99 397 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 TECRLQ5HYJ1 363 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 C9orf64Q5T6V5 341 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 LIPMQ5VYY2 423 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 DPPA4Q7L190 304 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 PIP4P1Q86T03 277 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 CRLF3Q8IUI8 442 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 SHISA5Q8N114 240 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 CSGALNACT1Q8TDX6 532 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 PPP4R1Q8TF05 950 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 HEXDCQ8WVB3 486 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 NRG4Q8WWG1 115 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 UBE2FQ969M7 185 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 BIRC8Q96P09 236 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 SIKE1Q9BRV8 207 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 CLPBQ9H078 707 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 P2RY12Q9H244 342 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 THAP10Q9P2Z0 257 aaPredicted RBP8.57□□□□□ -1.04
TPM3-213ENST00000368545 SUN2Q9UH99 717 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 COL4A2P08572 1712 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 A0A0U1RQS6 177 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 DYTNA2CJ06 578 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 C16orf96A6NNT2 1141 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 TARM1B6A8C7 271 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 E5RI56 91 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 C1QTNF3-AMACRE9PGA6 284 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 F8W8V4 182 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 LCE2BO14633 110 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 KIAA0754O94854 1291 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 C1SP09871 688 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 HNRNPLP14866 589 aaKnown RBP eCLIP8.57□□□□□ -1.04
TPM3-213ENST00000368545 SERPINB5P36952 375 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 GMPRP36959 345 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 MMP12P39900 470 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 GLRBP48167 497 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 SRSF1Q07955 248 aaKnown RBP eCLIP8.57□□□□□ -1.04
TPM3-213ENST00000368545 ELP6Q0PNE2 266 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 DLG1Q12959 904 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 SLC14A1Q13336 389 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 CTSL3PQ5NE16 218 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 MZT2AQ6P582 158 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 C6orf89Q6UWU4 347 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 BEND4Q6ZU67 534 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 TTC7BQ86TV6 843 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 PIM3Q86V86 326 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 SERPINA9Q86WD7 417 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 RALGPS2Q86X27 583 aaPredicted RBP8.57□□□□□ -1.04
TPM3-213ENST00000368545 SLC22A9Q8IVM8 553 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 GPR26Q8NDV2 337 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 OR6Y1Q8NGX8 325 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 RHEBL1Q8TAI7 183 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 WFDC12Q8WWY7 111 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 FOXRED1Q96CU9 486 aaPredicted RBP8.57□□□□□ -1.04
TPM3-213ENST00000368545 HSPA12BQ96MM6 686 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 FAM96AQ9H5X1 160 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 DYRK4Q9NR20 520 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 CPSF2Q9P2I0 782 aaKnown RBP8.57□□□□□ -1.04
TPM3-213ENST00000368545 TRMT6Q9UJA5 497 aaKnown RBP8.57□□□□□ -1.04
TPM3-213ENST00000368545 PCDHGB2Q9Y5G2 931 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 SNX13Q9Y5W8 968 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 OAS3Q9Y6K5 1087 aaKnown RBP8.57□□□□□ -1.04
TPM3-213ENST00000368545 USH1CQ9Y6N9 552 aa8.57□□□□□ -1.04
TPM3-213ENST00000368545 PRAMEF25A6NGN4 478 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 PRSS47A8MTI9 375 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 KPNA3O00505 521 aaPredicted RBP8.56□□□□□ -1.04
TPM3-213ENST00000368545 HYAL3O43820 417 aaPredicted RBP8.56□□□□□ -1.04
TPM3-213ENST00000368545 ENDOUP21128 410 aaKnown RBP8.56□□□□□ -1.04
TPM3-213ENST00000368545 ATP5F1P24539 256 aaPredicted RBP8.56□□□□□ -1.04
TPM3-213ENST00000368545 TNFRSF4P43489 277 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 SLC1A6P48664 564 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 DNAJB13P59910 316 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 ABCE1P61221 599 aaKnown RBP8.56□□□□□ -1.04
TPM3-213ENST00000368545 ATP6V0D1P61421 351 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 TIAL1Q01085 375 aaKnown RBP eCLIP8.56□□□□□ -1.04
TPM3-213ENST00000368545 TEKQ02763 1124 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 CHRNA6Q15825 494 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 HLA-DQA1Q5Y7H0 255 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 PARS2Q7L3T8 475 aaKnown RBP8.56□□□□□ -1.04
TPM3-213ENST00000368545 TMEM151AQ8N4L1 468 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 OXR1Q8N573 874 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 ZNF366Q8N895 744 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 GBP7Q8N8V2 638 aaPredicted RBP8.56□□□□□ -1.04
TPM3-213ENST00000368545 C10orf82Q8WW14 230 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 DERL2Q9GZP9 239 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 SMOXQ9NWM0 555 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 KLK13Q9UKR3 277 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 PIKFYVEQ9Y2I7 2098 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 A8MX80 341 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 OR1I1O60431 355 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 RNASEH2AO75792 299 aaKnown RBP8.56□□□□□ -1.04
TPM3-213ENST00000368545 DCTN3O75935 186 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 SBK3P0C264 359 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 ELFN1P0C7U0 828 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 HLA-EP13747 358 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 CD1DP15813 335 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 TFEBP19484 476 aa8.56□□□□□ -1.04
TPM3-213ENST00000368545 IL12RB1P42701 662 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms