RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 CPOXP36551 454 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 SP140Q13342 867 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 ANGPT1Q15389 498 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 LPAL2Q16609 132 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 PRRT3Q5FWE3 981 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 CFAP157Q5JU67 520 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 LYSMD4Q5XG99 296 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 BMP8AQ7Z5Y6 402 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 PHACTR4Q8IZ21 702 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 C2orf73Q8N5S3 287 aaPredicted RBP11.86□□□□□ -0.51
CAPN9-203ENST00000366666 FBXO27Q8NI29 283 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 MCOLN3Q8TDD5 553 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 TRPC4APQ8TEL6 797 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 JADE3Q92613 823 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 NELL1Q92832 810 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 CCDC126Q96EE4 140 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 CDK15Q96Q40 435 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 CENPKQ9BS16 269 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 HGH1Q9BTY7 390 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 LRRC61Q9BV99 259 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 IMP3Q9NV31 184 aaKnown RBP11.86□□□□□ -0.51
CAPN9-203ENST00000366666 ZNF225Q9UK10 706 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 FBXO4Q9UKT5 387 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 ACSL5Q9ULC5 683 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 G3BP2Q9UN86 482 aaKnown RBP11.86□□□□□ -0.51
CAPN9-203ENST00000366666 TDRKHQ9Y2W6 561 aaKnown RBP11.86□□□□□ -0.51
CAPN9-203ENST00000366666 A6NCN8 305 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 STX16-NPEPL1H3BU86 382 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 STX16O14662 325 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 SLC16A5O15375 505 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 CCNT2O60583 730 aaKnown RBP11.86□□□□□ -0.51
CAPN9-203ENST00000366666 HSPA4LO95757 839 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 BAG2O95816 211 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 ANXA5P08758 320 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 SP9P0CG40 484 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 JUNDP17535 347 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 IMPA1P29218 277 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 NXPH1P58417 271 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 SH3BP2P78314 561 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 BNC1Q01954 994 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 PLOD1Q02809 727 aaPredicted RBP11.86□□□□□ -0.51
CAPN9-203ENST00000366666 CDC16Q13042 620 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 FASTKQ14296 549 aaKnown RBP11.86□□□□□ -0.51
CAPN9-203ENST00000366666 PTCHD3Q3KNS1 767 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 UAP1L1Q3KQV9 507 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 ACAD11Q709F0 780 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 OR52B6Q8NGF0 335 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 JPH3Q8WXH2 748 aaPredicted RBP11.86□□□□□ -0.51
CAPN9-203ENST00000366666 FOPNLQ96NB1 174 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 INTS7Q9NVH2 962 aaKnown RBP11.86□□□□□ -0.51
CAPN9-203ENST00000366666 TRNAU1APQ9NX07 287 aaKnown RBP11.86□□□□□ -0.51
CAPN9-203ENST00000366666 WWOXQ9NZC7 414 aa11.86□□□□□ -0.51
CAPN9-203ENST00000366666 STOX2Q9P2F5 926 aaPredicted RBP11.86□□□□□ -0.51
CAPN9-203ENST00000366666 APOBEC3BQ9UH17 382 aaKnown RBP11.86□□□□□ -0.51
CAPN9-203ENST00000366666 SDC3O75056 442 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 CATP04040 527 aaKnown RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 JUNP05412 331 aaKnown RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 ENO2P09104 434 aaPredicted RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 HIST1H2AGP0C0S8 130 aaPredicted RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 UBTFL6P0CB48 400 aaPredicted RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 EPORP19235 508 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 HIST1H2ADP20671 130 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 MAP4P27816 1152 aaKnown RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 FOXA1P55317 472 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 CLCQ05315 142 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 RPE65Q16518 533 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 WDR45BQ5MNZ6 344 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 SH2D4BQ5SQS7 431 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 SULT1C3Q6IMI6 304 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 MAVSQ7Z434 540 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 ST13P4Q8IZP2 240 aaPredicted RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 OR5K2Q8NHB8 316 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 PIWIL2Q8TC59 973 aaKnown RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 GPBAR1Q8TDU6 330 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 ZNF480Q8WV37 535 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 HIST1H2AHQ96KK5 128 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 KCNA7Q96RP8 456 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 HIST1H2AJQ99878 128 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 H2AFJQ9BTM1 129 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 MENTQ9BUN1 341 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 CD244Q9BZW8 370 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 ZNF624Q9P2J8 865 aaPredicted RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 APOBEC2Q9Y235 224 aaKnown RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 FIS1Q9Y3D6 152 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 COMMD3-BMI1R4GMX3 469 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 GOLGA4Q13439 2230 aaKnown RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 ARID1BQ8NFD5 2236 aaPredicted RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 TMEM114B3SHH9 223 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 IFRD1O00458 451 aaPredicted RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 VILLO15195 856 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 NPHS1O60500 1241 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 CSF2P04141 144 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 S100BP04271 92 aaPredicted RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 GSTT1P30711 240 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 AFF3P51826 1226 aaKnown RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 YBX1P67809 324 aaKnown RBP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 CDKL1Q00532 357 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 ASPHQ12797 758 aa11.85□□□□□ -0.51
CAPN9-203ENST00000366666 PCBP2Q15366 365 aaKnown RBP eCLIP11.85□□□□□ -0.51
CAPN9-203ENST00000366666 ANKS6Q68DC2 871 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms