RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ANKRD12Q6UB98 2062 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 A0A1B0GX78 115 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 OR2A25A4D2G3 310 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 GOLGA8MH3BSY2 632 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 DSCR3O14972 297 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ZNF185O15231 689 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NRP2O60462 931 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SRPX2O60687 465 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 USP1O94782 785 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MED26O95402 600 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ALBP02768 609 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 F7P08709 466 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CHRM3P20309 590 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 RRADP55042 308 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MLLT10P55197 1068 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CTBP1Q13363 440 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 KLHL38Q2WGJ6 581 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NADK2Q4G0N4 442 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 RNASEH2BQ5TBB1 312 aaKnown RBP13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 YOD1Q5VVQ6 348 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ZNF470Q6ECI4 717 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FBXO42Q6P3S6 717 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CASC4Q6P4E1 433 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CYHR1Q6ZMK1 362 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 TTLL10Q6ZVT0 673 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NEK10Q6ZWH5 1172 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 RNF44Q7L0R7 432 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 OVCH1Q7RTY7 1134 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PPP1R32Q7Z5V6 425 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SPNS2Q8IVW8 549 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 DENND6AQ8IWF6 608 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 LMNTD2Q8IXW0 634 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 OTUD6BQ8N6M0 293 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FBXO15Q8NCQ5 510 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 OR9A1PQ8NGU1 263 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FKBP10Q96AY3 582 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NACC2Q96BF6 587 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ZNF669Q96BR6 464 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FAM136AQ96C01 138 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MIPEPQ99797 713 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 KCNF1Q9H3M0 494 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 CUTCQ9NTM9 273 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SAMD15Q9P1V8 674 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SNX12Q9UMY4 172 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 VPS9D1Q9Y2B5 631 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PTRH2Q9Y3E5 179 aaKnown RBP13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ZNF451Q9Y4E5 1061 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FAM169AQ9Y6X4 670 aa13.1□□□□□ -0.31
TNFRSF1A-202ENST00000366159 USP9XQ93008 2570 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 IGKV1-8A0A0C4DH67 115 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 GFYI3L273 518 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 KIF5CO60282 957 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 UTP20O75691 2785 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 MCM3P25205 808 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 OTX2P32243 289 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FOLR3P41439 243 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 GRM7Q14831 915 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SLC9A5Q14940 896 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ARHGAP19Q14CB8 494 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 DCAF10Q5QP82 559 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FRMPD2BQ6IN97 320 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 HPS6Q86YV9 775 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PPIL6Q8IXY8 311 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 RAB42Q8N4Z0 105 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 Q8NA96 180 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SKA2Q8WVK7 121 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 ASB11Q8WXH4 323 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 KCNJ9Q92806 393 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SLCO2A1Q92959 643 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SPSB2Q99619 263 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SELENOSQ9BQE4 189 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 WDR54Q9H977 334 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SYNPO2LQ9H987 977 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 SLC6A20Q9NP91 592 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 FBXO6Q9NRD1 293 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 NDOR1Q9UHB4 597 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 GPN3Q9UHW5 284 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 DHRS7Q9Y394 339 aa13.09□□□□□ -0.31
TNFRSF1A-202ENST00000366159 PCM1Q15154 2024 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 LOC105369274A0A096LPK9 316 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 LOC102723532A0A0G2JNH3 316 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 VSTM2BA6NLU5 285 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 HAUS5O94927 633 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ALAS2P22557 587 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 IVDP26440 423 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 SLC1A2P43004 574 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 TIAL1Q01085 375 aaKnown RBP eCLIP13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 NKG7Q16617 165 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 LONRF1Q17RB8 773 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 FAM214AQ32MH5 1076 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 WASHC2DQ5SRD0 308 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 JMJD6Q6NYC1 403 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 LRRC56Q8IYG6 542 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 OR4N4Q8N0Y3 316 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 DTWD1Q8N5C7 304 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 RBMXL3Q8N7X1 1067 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 GRK7Q8WTQ7 553 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 FER1L6-AS2Q96M78 137 aa13.08□□□□□ -0.32
TNFRSF1A-202ENST00000366159 PKP4Q99569 1192 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms