RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 ASB9Q96DX5 294 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 NUDT16L1Q9BRJ7 211 aaKnown RBP9.72□□□□□ -0.85
SIN3A-201ENST00000360439 ZCCHC2Q9C0B9 1178 aaKnown RBP9.72□□□□□ -0.85
SIN3A-201ENST00000360439 POLR1EQ9GZS1 481 aaKnown RBP9.72□□□□□ -0.85
SIN3A-201ENST00000360439 SLC6A17Q9H1V8 727 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 DZANK1Q9NVP4 752 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 PIH1D1Q9NWS0 290 aaKnown RBP9.72□□□□□ -0.85
SIN3A-201ENST00000360439 XPR1Q9UBH6 696 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 LAMP5Q9UJQ1 280 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 CDC14AQ9UNH5 594 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 DLGAP4Q9Y2H0 992 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 TBC1D3DA0A087WVF3 549 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 TBC1D3IA0A087WXS9 549 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 TBC1D3EA0A087X179 549 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 TBC1D3KA0A087X1G2 549 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 TBC1D3FA6NER0 549 aaPredicted RBP9.72□□□□□ -0.85
SIN3A-201ENST00000360439 TBC1D3LB9A6J9 549 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 GLP2RO95838 553 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 LDLRP01130 860 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 TBC1D3HP0C7X1 549 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 ERCC2P18074 760 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 XRCC1P18887 633 aaPredicted RBP9.72□□□□□ -0.85
SIN3A-201ENST00000360439 VAMP1P23763 118 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 EPHA3P29320 983 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 SOX6P35712 828 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 CLCQ05315 142 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 KANK2Q63ZY3 851 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 TBC1D3GQ6DHY5 549 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 TBC1D3CQ6IPX1 549 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 UGT2A3Q6UWM9 527 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.72□□□□□ -0.85
SIN3A-201ENST00000360439 CLEC20AQ6ZU45 233 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 CHST9Q7L1S5 443 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 CMC1Q7Z7K0 106 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 CCDC36Q8IYA8 594 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 TBC1D3Q8IZP1 549 aaPredicted RBP9.72□□□□□ -0.85
SIN3A-201ENST00000360439 DEDD2Q8WXF8 326 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 SGF29Q96ES7 293 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 ZNF576Q9H609 170 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 SLC9A8Q9Y2E8 581 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 LRRC37AA6NMS7 1700 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 LOC100506127A0A0U1RQW1 187 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 DCLK1O15075 740 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 TPH1P17752 444 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 ZNF33AQ06730 810 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 TNK2Q07912 1038 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 GRM2Q14416 872 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 PAFAH1B3Q15102 231 aaKnown RBP9.72□□□□□ -0.85
SIN3A-201ENST00000360439 IMPG1Q17R60 797 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 INTS11Q5TA45 600 aaKnown RBP9.72□□□□□ -0.85
SIN3A-201ENST00000360439 MPP5Q8N3R9 675 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 DHRSXQ8N5I4 330 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 LRRC17Q8N6Y2 441 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 PDPRQ8NCN5 879 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 MZB1Q8WU39 189 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 ZHX1-C8orf76Q96EF9 292 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 MARK4Q96L34 752 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 TWNKQ96RR1 684 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 SORBS1Q9BX66 1292 aaKnown RBP9.72□□□□□ -0.85
SIN3A-201ENST00000360439 RERGLQ9H628 205 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 PAK6Q9NQU5 681 aaPredicted RBP9.72□□□□□ -0.85
SIN3A-201ENST00000360439 RUVBL1Q9Y265 456 aaKnown RBP9.72□□□□□ -0.85
SIN3A-201ENST00000360439 PRKAB1Q9Y478 270 aa9.72□□□□□ -0.85
SIN3A-201ENST00000360439 POLR2AP24928 1970 aaKnown RBP9.71□□□□□ -0.85
SIN3A-201ENST00000360439 CHURC1-FNTBB4DL54 471 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 RFXAPO00287 272 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 HSPA12AO43301 675 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 CLDN11O75508 207 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 STBD1O95210 358 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 CCNYL3P0C7X3 344 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 AZGP1P25311 298 aaKnown RBP9.71□□□□□ -0.85
SIN3A-201ENST00000360439 ADRA1BP35368 520 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 DAOAP59103 153 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 POU6F1Q14863 301 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 ZIK1Q3SY52 487 aaPredicted RBP9.71□□□□□ -0.85
SIN3A-201ENST00000360439 PROSER1Q86XN7 944 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 PHACTR4Q8IZ21 702 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 TDHQ8IZJ6 230 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 CCDC185Q8N715 623 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 TPD52L3Q96J77 140 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 CYP2S1Q96SQ9 504 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 C1QTNF7Q9BXJ2 289 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 SMG9Q9H0W8 520 aaKnown RBP9.71□□□□□ -0.85
SIN3A-201ENST00000360439 TDP1Q9NUW8 608 aa9.71□□□□□ -0.85
SIN3A-201ENST00000360439 ZNF223Q9UK11 482 aaPredicted RBP9.71□□□□□ -0.85
SIN3A-201ENST00000360439 TCRBV5S1A1TA0A578 114 aa9.71□□□□□ -0.86
SIN3A-201ENST00000360439 LOC110117498-PIK3R3F6TDL0 507 aa9.71□□□□□ -0.86
SIN3A-201ENST00000360439 HNF1AP20823 631 aa9.71□□□□□ -0.86
SIN3A-201ENST00000360439 TACR2P21452 398 aa9.71□□□□□ -0.86
SIN3A-201ENST00000360439 PTPN3P26045 913 aa9.71□□□□□ -0.86
SIN3A-201ENST00000360439 DGKGP49619 791 aa9.71□□□□□ -0.86
SIN3A-201ENST00000360439 OGFRL1Q5TC84 451 aaPredicted RBP9.71□□□□□ -0.86
SIN3A-201ENST00000360439 FAM46CQ5VWP2 391 aa9.71□□□□□ -0.86
SIN3A-201ENST00000360439 OR2T34Q8NGX1 318 aa9.71□□□□□ -0.86
SIN3A-201ENST00000360439 OR2T3Q8NH03 318 aa9.71□□□□□ -0.86
SIN3A-201ENST00000360439 ANGPTL6Q8NI99 470 aa9.71□□□□□ -0.86
SIN3A-201ENST00000360439 CXorf40AQ8TE69 158 aa9.71□□□□□ -0.86
SIN3A-201ENST00000360439 SLAMF7Q9NQ25 335 aa9.71□□□□□ -0.86
SIN3A-201ENST00000360439 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.71□□□□□ -0.86
SIN3A-201ENST00000360439 SIX4Q9UIU6 781 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms