RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 SYN1P17600 705 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 HOXC12P31275 282 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 ABATP80404 500 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 NFATC2Q13469 925 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 FBXO43Q4G163 708 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 FAM46DQ8NEK8 389 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 MAPK15Q8TD08 544 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 SETD7Q8WTS6 366 aaKnown RBP4.75□□□□□ -1.65
SCN3A-202ENST00000360093 KLHDC7BQ96G42 594 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 SIGLEC10Q96LC7 697 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 TOX2Q96NM4 488 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 FIZ1Q96SL8 496 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 RMI1Q9H9A7 625 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 FARSBQ9NSD9 589 aaKnown RBP4.75□□□□□ -1.65
SCN3A-202ENST00000360093 MKS1Q9NXB0 559 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 PPIEQ9UNP9 301 aaKnown RBP4.75□□□□□ -1.65
SCN3A-202ENST00000360093 SLC22A14Q9Y267 594 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 STON1Q9Y6Q2 735 aa4.75□□□□□ -1.65
SCN3A-202ENST00000360093 TCRBV7S3A2A0A539 114 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 SAGE2PA6NJ88 616 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 IQCF5A8MTL0 148 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 MMP20O60882 483 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 PRAMEF12O95522 483 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 IL12RB1P42701 662 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 OMPP47874 163 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 IRF9Q00978 393 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 DUOXA1Q1HG43 343 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.74□□□□□ -1.65
SCN3A-202ENST00000360093 TBC1D25Q3MII6 688 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 KLHL26Q53HC5 615 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 KLHL17Q6TDP4 642 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 PACS2Q86VP3 889 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 SLC34A3Q8N130 599 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 TMEM145Q8NBT3 493 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 OR56A1Q8NGH5 318 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 OR5K1Q8NHB7 308 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 ZCCHC10Q8TBK6 192 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 RSPH9Q9H1X1 276 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-202ENST00000360093 DENND2DQ9H6A0 471 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-202ENST00000360093 MVB12BQ9H7P6 319 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 OSER1Q9NX31 292 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 MRPL39Q9NYK5 338 aaKnown RBP4.74□□□□□ -1.65
SCN3A-202ENST00000360093 EVPLQ92817 2033 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 A0A1W2PP18 115 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 E7ESA3 106 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 SLC30A4O14863 429 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 NDUFS4O43181 175 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 RSL1D1O76021 490 aaKnown RBP4.74□□□□□ -1.65
SCN3A-202ENST00000360093 PRKAR1AP10644 381 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 C5AR1P21730 350 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 NRG1Q02297 640 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-202ENST00000360093 ZNF33BQ06732 778 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 ZNF846Q147U1 533 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 TGFBIQ15582 683 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 BICRALQ6AI39 1079 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 FAM47BQ8NA70 645 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 SHISA4Q96DD7 197 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 DPYSL5Q9BPU6 564 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 DCUN1D5Q9BTE7 237 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 AKTIPQ9H8T0 292 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 MKKSQ9NPJ1 570 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-202ENST00000360093 TIMMDC1Q9NPL8 285 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 EHD3Q9NZN3 535 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 SUSD2Q9UGT4 822 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 RIMKLBQ9ULI2 386 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 TSC22D4Q9Y3Q8 395 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 SPIN1Q9Y657 262 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-202ENST00000360093 TRBV23OR9-2A0A075B6M9 112 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 CCDC182A6NF36 153 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 MATN2O00339 956 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 MAFKO60675 156 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 SERPINA3P01011 423 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 TCF4P15884 667 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 AOC1P19801 751 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 DSTNP60981 165 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 FAM214AQ32MH5 1076 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 VWA5B1Q5TIE3 1220 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 KIAA1161Q6NSJ0 714 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 PAOXQ6QHF9 649 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 ZMIZ2Q8NF64 920 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 RNASE11Q8TAA1 199 aaKnown RBP4.74□□□□□ -1.65
SCN3A-202ENST00000360093 VANGL1Q8TAA9 524 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-202ENST00000360093 GPR151Q8TDV0 419 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 IPCEF1Q8WWN9 437 aaPredicted RBP4.74□□□□□ -1.65
SCN3A-202ENST00000360093 COX4I2Q96KJ9 171 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 SPATA9Q9BWV2 254 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 ARHGEF3Q9NR81 526 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 A0A0D9SEW6 157 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 CLIC1O00299 241 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 STC2O76061 302 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 ACRV1P26436 265 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 NUDT1P36639 197 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 RAB25P57735 213 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 TMEM63BQ5T3F8 832 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 EPGNQ6UW88 154 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 GOLGA7Q7Z5G4 137 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 GALNT7Q86SF2 657 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 FIBINQ8TAL6 211 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 GLYATL1Q969I3 302 aa4.74□□□□□ -1.65
SCN3A-202ENST00000360093 YTHDF1Q9BYJ9 559 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms