RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 C2CD4AQ8NCU7 369 aaPredicted RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 FAM156AQ8NDB6 213 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 ZMIZ2Q8NF64 920 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 CANT1Q8WVQ1 401 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 TSEN15Q8WW01 171 aaKnown RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 HTRA1Q92743 480 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 GTPBP3Q969Y2 492 aaKnown RBP11.48□□□□□ -0.57
COL9A1-202ENST00000357250 BORCS6Q96GS4 357 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 FIZ1Q96SL8 496 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 MGME1Q9BQP7 344 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 SLC35C2Q9NQQ7 365 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 PFDN2Q9UHV9 154 aa11.48□□□□□ -0.57
COL9A1-202ENST00000357250 EFCAB9A8MZ26 197 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 C9IYK1 514 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 H0YGN5 161 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 ITM2AO43736 263 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 PSIP1O75475 530 aaKnown RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 XRCC1P18887 633 aaPredicted RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 GSK3BP49841 420 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 GJA9P57773 515 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 RPP38P78345 283 aaKnown RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 OGDHQ02218 1023 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 PCDH1Q08174 1060 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 GRB14Q14449 540 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 PDGFRLQ15198 375 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 XKR4Q5GH76 650 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 PRSS55Q6UWB4 352 aaPredicted RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 FRRS1Q6ZNA5 592 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 OTOP2Q7RTS6 562 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 SMG8Q8ND04 991 aaKnown RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 SH3RF2Q8TEC5 729 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 LMLNQ96KR4 655 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 C12orf66Q96MD2 445 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 OR52B2Q96RD2 323 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 HBEGFQ99075 208 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 FEM1AQ9BSK4 669 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 NFS1Q9Y697 457 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 DGKBQ9Y6T7 804 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 NEMP2A6NFY4 417 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 E7ESA3 106 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 PRAMEF11O60813 436 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 C7P10643 843 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 DNASE1L1P49184 302 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 SLBPQ14493 270 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 RBM23Q86U06 439 aaKnown RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 SATL1Q86VE3 508 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 ZNF433Q8N7K0 673 aaPredicted RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 AURKBQ96GD4 344 aaPredicted RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 CEP295NLQ96MC4 621 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 POLR2J2Q9GZM3 115 aaKnown RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 CDC14AQ9UNH5 594 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 C9JVG2 144 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 PRODHO43272 600 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 OAS1P00973 400 aaKnown RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 GRIA1P42261 906 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 CYP4F8P98187 520 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 PPP2R2BQ00005 443 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 TARDBPQ13148 414 aaKnown RBP eCLIP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 DSC3Q14574 896 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 EMC10Q5UCC4 262 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 TUBA3EQ6PEY2 450 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 C6orf89Q6UWU4 347 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 IFNL1Q8IU54 200 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 CILP2Q8IUL8 1156 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 GPER1Q99527 375 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 OR2AG1Q9H205 316 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 R3HDMLQ9H3Y0 253 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 ZNF358Q9NW07 568 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 TRNAU1APQ9NX07 287 aaKnown RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 IL36AQ9UHA7 158 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 RBM7Q9Y580 266 aaKnown RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 DNAJB5O75953 348 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 INHAP05111 366 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 ATP1B2P14415 290 aaPredicted RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 GRIK2Q13002 908 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 SEMA3AQ14563 771 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 CNPY1Q3B7I2 92 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 CRTC2Q53ET0 693 aaPredicted RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 KLHL36Q8N4N3 616 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 PQLC3Q8N755 202 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 GOLM1Q8NBJ4 401 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 CRYGNQ8WXF5 182 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 THRSPQ92748 146 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 CNDP2Q96KP4 475 aaKnown RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 MTERF1Q99551 399 aaKnown RBP11.47□□□□□ -0.57
COL9A1-202ENST00000357250 WDR26Q9H7D7 661 aa11.47□□□□□ -0.57
COL9A1-202ENST00000357250 PIRO00625 290 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 AKAP8O43823 692 aaKnown RBP11.46□□□□□ -0.57
COL9A1-202ENST00000357250 SOCS5O75159 536 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 TACSTD2P09758 323 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 PROZP22891 400 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 RING1Q06587 406 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 TIGD6Q17RP2 521 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 TMEM198Q66K66 360 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 OLFML2AQ68BL7 652 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 PDE12Q6L8Q7 609 aaKnown RBP11.46□□□□□ -0.57
COL9A1-202ENST00000357250 CXorf57Q6NSI4 855 aaKnown RBP11.46□□□□□ -0.57
COL9A1-202ENST00000357250 QSOX2Q6ZRP7 698 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 NUP54Q7Z3B4 507 aa11.46□□□□□ -0.57
COL9A1-202ENST00000357250 LRRTM4Q86VH4 590 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms