RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 ADHFE1Q8IWW8 467 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 NKAPQ8N5F7 415 aaKnown RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 CELF2-AS1Q8N7Q2 184 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 KLHDC9Q8NEP7 349 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 FLCNQ8NFG4 579 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 TSPEARQ8WU66 669 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 PHF10Q8WUB8 498 aaKnown RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 SNAPC3Q92966 411 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 UBE2FQ969M7 185 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ULK4Q96C45 1275 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 NUSAP1Q9BXS6 441 aaKnown RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ACTL8Q9H568 366 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 SMPD4Q9NXE4 827 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 MARCH2Q9P0N8 246 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 AFF4Q9UHB7 1163 aaKnown RBP8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 ATP6V1HQ9UI12 483 aa8.05□□□□□ -1.12
CDC42SE1-201ENST00000357235 H0Y626 953 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 PRMT5O14744 637 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 STX7O15400 261 aaKnown RBP8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 ACSL4O60488 711 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 SCO1O75880 301 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 YES1P07947 543 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 PRR35P0CG20 571 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 COL6A1P12109 1028 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 PBX3P40426 434 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 MLLT3P42568 568 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 HTR3AP46098 478 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 ST13P50502 369 aaKnown RBP8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 ISL1P61371 349 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 SMARCB1Q12824 385 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 CCL14Q16627 93 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 AFMIDQ63HM1 303 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 METTL2BQ6P1Q9 378 aaKnown RBP8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 CXCL17Q6UXB2 119 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 AHSA2Q719I0 299 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 SLC22A15Q8IZD6 547 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 LIX1Q8N485 282 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 MDGA1Q8NFP4 955 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 HERVK_113Q902F9 699 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 GTF2H4Q92759 462 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 FBXO32Q969P5 355 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 MUL1Q969V5 352 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 BARD1Q99728 777 aaKnown RBP8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 CINPQ9BW66 212 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 COQ3Q9NZJ6 369 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 KIF17Q9P2E2 1029 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 TEKT2Q9UIF3 430 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 TLR6Q9Y2C9 796 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 TSC2P49815 1807 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 SGTAO43765 313 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 FAM20BO75063 409 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 IFI30P13284 250 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 BMP1P13497 986 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 HOXB8P17481 243 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 OGNP20774 298 aaKnown RBP8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 GRK3P35626 688 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 DEFA1P59665 94 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 DEFA3P59666 94 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 CDK5R2Q13319 367 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 SERINC3Q13530 473 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 GTF2H2Q13888 395 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 PON2Q15165 354 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 CPSF6Q16630 551 aaKnown RBP eCLIP8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 CLVS2Q5SYC1 327 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 GTF2H2CQ6P1K8 395 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 AFTPHQ6ULP2 937 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 LINGO4Q6UY18 593 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 SPATC1Q76KD6 591 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 DGLUCYQ7Z3D6 616 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 GOLGA7Q7Z5G4 137 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 PLEKHH3Q7Z736 793 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 MON1AQ86VX9 555 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 CLDN19Q8N6F1 224 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 ANKRD53Q8N9V6 530 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 LHFPL5Q8TAF8 219 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 NETO1Q8TDF5 533 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 SKA2Q8WVK7 121 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 TSSK3Q96PN8 268 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 SEPT5Q99719 369 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 GPBP1L1Q9HC44 474 aaPredicted RBP8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 WASH6PQ9NQA3 447 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 LATS2Q9NRM7 1088 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 SLC6A13Q9NSD5 602 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 TMEM248Q9NWD8 314 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 FBXO10Q9UK96 956 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 PKP3Q9Y446 797 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 PMF1-BGLAPU3KQ54 211 aa8.04□□□□□ -1.12
CDC42SE1-201ENST00000357235 LOC100506127A0A0U1RQW1 187 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 FAM25EA8MYX2 175 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 CREG1O75629 220 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 PRSS23O95084 383 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 CHRNA1P02708 482 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 PGRP06401 933 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 MSH3P20585 1137 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 EFNA1P20827 205 aaPredicted RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 UQCRC1P31930 480 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 RPL9P32969 192 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 THPOP40225 353 aa8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 MRPS6P82932 125 aaKnown RBP8.03□□□□□ -1.12
CDC42SE1-201ENST00000357235 IL10RBQ08334 325 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms