RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 MRM3Q9HC36 420 aaKnown RBP10.22□□□□□ -0.77
CAPN3-204ENST00000356316 LZTFL1Q9NQ48 299 aa10.22□□□□□ -0.77
CAPN3-204ENST00000356316 MARCH4Q9P2E8 410 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-204ENST00000356316 NXT1Q9UKK6 140 aaKnown RBP10.22□□□□□ -0.77
CAPN3-204ENST00000356316 COPG1Q9Y678 874 aaKnown RBP10.22□□□□□ -0.77
CAPN3-204ENST00000356316 FAM169AQ9Y6X4 670 aa10.22□□□□□ -0.77
CAPN3-204ENST00000356316 MAST4O15021 2626 aa10.22□□□□□ -0.77
CAPN3-204ENST00000356316 SNRNP200O75643 2136 aaKnown RBP10.21□□□□□ -0.77
CAPN3-204ENST00000356316 SEC16AO15027 2179 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 PTPN13Q12923 2485 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 E5RI56 91 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 C1orf105O95561 183 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 FGGP02679 453 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 ESR1P03372 595 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 UMODP07911 640 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 CCDC175P0C221 793 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 ERVK-10P10266 1014 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 PAMP19021 973 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 RPS3P23396 243 aaKnown RBP eCLIP10.21□□□□□ -0.77
CAPN3-204ENST00000356316 MGAT1P26572 445 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 CMPK1P30085 196 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 MRPL49Q13405 166 aaKnown RBP10.21□□□□□ -0.77
CAPN3-204ENST00000356316 GRB7Q14451 532 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 NKG7Q16617 165 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 PRR30Q53SZ7 412 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-204ENST00000356316 PRAMEF13Q5VWM6 474 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 FCRL6Q6DN72 434 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 CASC4Q6P4E1 433 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 LRRC8BQ6P9F7 803 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 SNRNP40Q96DI7 357 aaKnown RBP10.21□□□□□ -0.77
CAPN3-204ENST00000356316 C19orf60Q96EN9 201 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 MIPEPQ99797 713 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 KIFC1Q9BW19 673 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 SOX17Q9H6I2 414 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-204ENST00000356316 ZNF552Q9H707 407 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-204ENST00000356316 ZNF304Q9HCX3 659 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 FAM114A2Q9NRY5 505 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 AGPAT4Q9NRZ5 378 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 SEMA3GQ9NS98 782 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 TREX1Q9NSU2 369 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 ASF1BQ9NVP2 202 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 UTP6Q9NYH9 597 aaKnown RBP10.21□□□□□ -0.77
CAPN3-204ENST00000356316 SAMD15Q9P1V8 674 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 PLEKHB1Q9UF11 243 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-204ENST00000356316 ZC3H7BQ9UGR2 993 aaKnown RBP10.21□□□□□ -0.77
CAPN3-204ENST00000356316 TSR3Q9UJK0 312 aaKnown RBP10.21□□□□□ -0.77
CAPN3-204ENST00000356316 FBXL4Q9UKA2 621 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 VPS9D1Q9Y2B5 631 aa10.21□□□□□ -0.77
CAPN3-204ENST00000356316 PCM1Q15154 2024 aa10.21□□□□□ -0.78
CAPN3-204ENST00000356316 NBASA2RRP1 2371 aa10.21□□□□□ -0.78
CAPN3-204ENST00000356316 A0A0J9YVX5 310 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 MAGEB16A2A368 324 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 NRDCO43847 1150 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 CEP104O60308 925 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 CNOT3O75175 753 aaKnown RBP10.2□□□□□ -0.78
CAPN3-204ENST00000356316 SEMA7AO75326 666 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 ONECUT2O95948 504 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 MCM3P25205 808 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 RPA3P35244 121 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-204ENST00000356316 HSD17B2P37059 387 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 OR1D4P47884 311 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 KCNJ1P48048 391 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 CARSP49589 748 aaKnown RBP10.2□□□□□ -0.78
CAPN3-204ENST00000356316 TERF1P54274 439 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 TSTA3Q13630 321 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-204ENST00000356316 NR6A1Q15406 480 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 RBBP7Q16576 425 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 TUBB8Q3ZCM7 444 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 ANKRD20A4Q4UJ75 823 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 PRMT9Q6P2P2 845 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 ANKRD12Q6UB98 2062 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 SHISA6Q6ZSJ9 500 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 PARP9Q8IXQ6 854 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 METTL27Q8N6F8 245 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-204ENST00000356316 TRIM58Q8NG06 486 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 OR2L3Q8NG85 312 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 HMGCLL1Q8TB92 370 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 COG1Q8WTW3 980 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 YIPF2Q9BWQ6 316 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 SLC26A1Q9H2B4 701 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 SLC6A20Q9NP91 592 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 SLC22A11Q9NSA0 550 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 SYBUQ9NX95 663 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 CDC14AQ9UNH5 594 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 CRYL1Q9Y2S2 319 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 NFS1Q9Y697 457 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 MAU2Q9Y6X3 613 aa10.2□□□□□ -0.78
CAPN3-204ENST00000356316 FER1L5A0AVI2 2057 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 NUP210LQ5VU65 1888 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 PCSK5Q92824 1860 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 CTAGE9A4FU28 777 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 FITM1A5D6W6 292 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 ANKUB1A6NFN9 424 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 ZNF839A8K0R7 811 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 GOLGA8KD6RF30 607 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 GOLGA8TH3BQL2 631 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 MASP2O00187 686 aa10.19□□□□□ -0.78
CAPN3-204ENST00000356316 PRPF4O43172 522 aaKnown RBP eCLIP10.19□□□□□ -0.78
CAPN3-204ENST00000356316 PRICKLE3O43900 615 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-204ENST00000356316 CTSVO60911 334 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms