RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 ZNF347Q96SE7 839 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 TRIT1Q9H3H1 467 aaKnown RBP13.74□□□□□ -0.21
SREBF1-202ENST00000355815 ATP13A3Q9H7F0 1226 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 TBC1D17Q9HA65 648 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 SLC25A13Q9UJS0 675 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 TNPO3Q9Y5L0 923 aaKnown RBP13.74□□□□□ -0.21
SREBF1-202ENST00000355815 OAS3Q9Y6K5 1087 aaKnown RBP13.74□□□□□ -0.21
SREBF1-202ENST00000355815 GLYATL1P3A0A0U1RQE8 302 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 A0A1W2PRG6 482 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 FAM92AA1XBS5 289 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 AREL1O15033 823 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 SGTAO43765 313 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 RPLP0P05388 317 aaKnown RBP13.74□□□□□ -0.21
SREBF1-202ENST00000355815 RAP2AP10114 183 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 G6PDP11413 515 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 HOXB8P17481 243 aaPredicted RBP13.74□□□□□ -0.21
SREBF1-202ENST00000355815 STARP49675 285 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 GTF2H2Q13888 395 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 CLLU1OSQ5K130 101 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 PPP2R2DQ66LE6 453 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 CXorf57Q6NSI4 855 aaKnown RBP13.74□□□□□ -0.21
SREBF1-202ENST00000355815 GTF2H2CQ6P1K8 395 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 UBE2R2Q712K3 238 aaPredicted RBP13.74□□□□□ -0.21
SREBF1-202ENST00000355815 TAS1R1Q7RTX1 841 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 NUDT8Q8WV74 236 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 BIRC7Q96CA5 298 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 RTP3Q9BQQ7 232 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 EIF3KQ9UBQ5 218 aaKnown RBP13.74□□□□□ -0.21
SREBF1-202ENST00000355815 SUCOQ9UBS9 1254 aaKnown RBP13.74□□□□□ -0.21
SREBF1-202ENST00000355815 THSD7AQ9UPZ6 1657 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 SSC5DA1L4H1 1573 aa13.74□□□□□ -0.21
SREBF1-202ENST00000355815 A0A1W2PRU2 124 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 ZNF623O75123 536 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 ATE1O95260 518 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 EOMESO95936 686 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 RLN1P04808 185 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 OLR1P78380 273 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 SEMA3AQ14563 771 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 PIANPQ8IYJ0 282 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 CMTM8Q8IZV2 173 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 ABHD11Q8NFV4 315 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 ROPN1LQ96C74 230 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 ZNF558Q96NG5 402 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 KCNC2Q96PR1 638 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 KATNBL1Q9H079 304 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 C11orf16Q9NQ32 467 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 N6AMT1Q9Y5N5 214 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 CLCA3PQ9Y6N3 262 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 C12orf71A8MTZ7 269 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 ADAM12O43184 909 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 DENRO43583 198 aaKnown RBP13.73□□□□□ -0.21
SREBF1-202ENST00000355815 ABCB7O75027 752 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 EFCAB14O75071 495 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 OR56A5P0C7T3 313 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 PABPC1P11940 636 aaKnown RBP13.73□□□□□ -0.21
SREBF1-202ENST00000355815 CD97P48960 835 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 AP2S1P53680 142 aaPredicted RBP13.73□□□□□ -0.21
SREBF1-202ENST00000355815 ADGRF1Q5T601 910 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 CDC73Q6P1J9 531 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 IGFN1Q86VF2 1251 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 CCDC28AQ8IWP9 274 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 PEX5LQ8IYB4 626 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 SCML4Q8N228 414 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 MYLIPQ8WY64 445 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 FUNDC2Q9BWH2 189 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 DCDC1P59894 354 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 DEFB115Q30KQ5 88 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 UAP1L1Q3KQV9 507 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 FAM171BQ6P995 826 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 TUBA3EQ6PEY2 450 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 RBFAQ8N0V3 343 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 AADATQ8N5Z0 425 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 DTX3Q8N9I9 347 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 TMCO6Q96DC7 493 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 CDK5RAP1Q96SZ6 601 aaKnown RBP13.73□□□□□ -0.21
SREBF1-202ENST00000355815 INTS7Q9NVH2 962 aaKnown RBP13.73□□□□□ -0.21
SREBF1-202ENST00000355815 H3BMQ9 156 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 TNFRSF11BO00300 401 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 SYN3O14994 580 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 MUSKO15146 869 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 CCL16O15467 120 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 COCHO43405 550 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 UMPSP11172 480 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 LEPRP48357 1165 aaKnown RBP13.73□□□□□ -0.21
SREBF1-202ENST00000355815 ARSFP54793 590 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 XKR6Q5GH73 641 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.73□□□□□ -0.211e-7■■■■□ 25.2
SREBF1-202ENST00000355815 PDE12Q6L8Q7 609 aaKnown RBP13.73□□□□□ -0.21
SREBF1-202ENST00000355815 TRIM40Q6P9F5 258 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 C17orf99Q6UX52 265 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 MFSD6LQ8IWD5 586 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 PHACTR4Q8IZ21 702 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 LSMEM2Q8N112 164 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 UMODL1-AS1Q8N2C9 162 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 LIX1Q8N485 282 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 MEIOBQ8N635 442 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 COG8Q96MW5 612 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 IGSF5Q9NSI5 407 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 TMEM248Q9NWD8 314 aa13.73□□□□□ -0.21
SREBF1-202ENST00000355815 ERVK13-1Q9NX77 482 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms