RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 EGFLAMQ63HQ2 1017 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 BRAT1Q6PJG6 821 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 C1orf52Q8N6N3 182 aaKnown RBP12.92□□□□□ -0.34
SCN8A-202ENST00000355133 TNFAIP8L1Q8WVP5 186 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 PLAGL1Q9UM63 463 aa12.92□□□□□ -0.34
SCN8A-202ENST00000355133 AREL1O15033 823 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 OPN1SWP03999 348 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 RB1P06400 928 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 NDUFS1P28331 727 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 SP140Q13342 867 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 OLIG2Q13516 323 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 ZNF598Q86UK7 904 aaKnown RBP12.91□□□□□ -0.34
SCN8A-202ENST00000355133 RAB43Q86YS6 212 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 OR4E2Q8NGC2 313 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 OR5K1Q8NHB7 308 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 KCTD13Q8WZ19 329 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 TDP1Q9NUW8 608 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 OXSMQ9NWU1 459 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 PCDHGA12O60330 932 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 POP7O75817 140 aaKnown RBP12.91□□□□□ -0.34
SCN8A-202ENST00000355133 AGXTP21549 392 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 GATMP50440 423 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 PLGLB1Q02325 96 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 MAPK14Q16539 360 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 OR4F3Q6IEY1 312 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 TMEM110Q86TL2 294 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 Q8N9G6 341 aaPredicted RBP12.91□□□□□ -0.34
SCN8A-202ENST00000355133 BRD7Q9NPI1 651 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 FARSBQ9NSD9 589 aaKnown RBP12.91□□□□□ -0.34
SCN8A-202ENST00000355133 DNAJB9Q9UBS3 223 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 POMPQ9Y244 141 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 KCNK6Q9Y257 313 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 KHNYNO15037 678 aaKnown RBP12.91□□□□□ -0.34
SCN8A-202ENST00000355133 PIGRP01833 764 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 ENGP17813 658 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 CEBPGP53567 150 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 DSTNP60981 165 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 DPY19L1Q2PZI1 675 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 OXR1Q8N573 874 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 CST11Q9H112 138 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 SLC32A1Q9H598 525 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 ITM2CQ9NQX7 267 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 TLR9Q9NR96 1032 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 RIMKLBQ9ULI2 386 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 SCML2Q9UQR0 700 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 TLL2Q9Y6L7 1015 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 DUXAA6NLW8 204 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 A8MT66 165 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 CCNKO75909 580 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 TYRP14679 529 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 CDKN1CP49918 316 aaPredicted RBP12.91□□□□□ -0.34
SCN8A-202ENST00000355133 CYP1B1Q16678 543 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 MLIPQ5VWP3 458 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 THOC6Q86W42 341 aaKnown RBP12.91□□□□□ -0.34
SCN8A-202ENST00000355133 CCDC54Q8NEL0 328 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 GFM1Q96RP9 751 aaKnown RBP12.91□□□□□ -0.34
SCN8A-202ENST00000355133 TMEM209Q96SK2 561 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 MGME1Q9BQP7 344 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 EFCAB11Q9BUY7 163 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 BTBD1Q9H0C5 482 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 AKTIPQ9H8T0 292 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 CDC14AQ9UNH5 594 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 WASF2Q9Y6W5 498 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 ZNF726A6NNF4 738 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 C9J4A7 227 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 PRPS1L1P21108 318 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 PTX3P26022 381 aaPredicted RBP12.91□□□□□ -0.34
SCN8A-202ENST00000355133 CASRP41180 1078 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 ROR2Q01974 943 aaKnown RBP12.91□□□□□ -0.34
SCN8A-202ENST00000355133 NPY5RQ15761 445 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 LRRC66Q68CR7 880 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 LINGO2Q7L985 606 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 ZNF384Q8TF68 577 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 DHRS1Q96LJ7 313 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 KCTD3Q9Y597 815 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 FKBP7Q9Y680 259 aa12.91□□□□□ -0.34
SCN8A-202ENST00000355133 HLA-EP13747 358 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 CRB2Q5IJ48 1285 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 ALG1LQ6GMV1 187 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 ADNP2Q6IQ32 1131 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 OR10G2Q8NGC3 310 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 SLC35B2Q8TB61 432 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 BPIFB1Q8TDL5 484 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 LMX1AQ8TE12 382 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 SNTG1Q9NSN8 517 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 UTS2RQ9UKP6 389 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 RBM47A0AV96 593 aaKnown RBP12.9□□□□□ -0.34
SCN8A-202ENST00000355133 UPK3BL1B0FP48 263 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 TMEM233B4DJY2 109 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 UPK3BL2E5RIL1 263 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 CHRNA1P02708 482 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 FOXN2P32314 431 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 PLA2G15Q8NCC3 412 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 OR5M3Q8NGP4 307 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 KCNC2Q96PR1 638 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 MED28Q9H204 178 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 EBF3Q9H4W6 596 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 CBFA2T3O75081 653 aa12.9□□□□□ -0.34
SCN8A-202ENST00000355133 JUNP05412 331 aaKnown RBP12.9□□□□□ -0.34
SCN8A-202ENST00000355133 CD2P06729 351 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms