RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 BTG4Q9NY30 223 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 KLHL21Q9UJP4 597 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 SCAMP1O15126 338 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 CDK1P06493 297 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 RALGPS1Q5JS13 557 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 TMEM214Q6NUQ4 689 aaKnown RBP12.35□□□□□ -0.43
COL6A3-203ENST00000353578 OR4L1Q8NH43 312 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 GLTPQ9NZD2 209 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 IRS2Q9Y4H2 1338 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 BHLHE40O14503 412 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 C2P06681 752 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 CHATP28329 748 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 HOXD10P28358 340 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 UGT2A3Q6UWM9 527 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 ISLR2Q6UXK2 745 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 SLC36A4Q6YBV0 504 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 TRIM46Q7Z4K8 759 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 MMP19Q99542 508 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 NUP205Q92621 2012 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 GLYATL1P3A0A0U1RQE8 302 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 SLC25A27O95847 323 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 POLR2CP19387 275 aaPredicted RBP12.35□□□□□ -0.43
COL6A3-203ENST00000353578 PPP3CAQ08209 521 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 RNF44Q7L0R7 432 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 ELP5Q8TE02 316 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 MGAT4CQ9UBM8 478 aa12.35□□□□□ -0.43
COL6A3-203ENST00000353578 GKP32189 559 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 PROX2Q3B8N5 592 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 FAM83AQ86UY5 434 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 CCDC54Q8NEL0 328 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 TMBIM1Q969X1 311 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 MYRFLQ96LU7 910 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 EIF5A2Q9GZV4 153 aaKnown RBP12.34□□□□□ -0.43
COL6A3-203ENST00000353578 GBA3Q9H227 469 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 WASH6PQ9NQA3 447 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 ALKQ9UM73 1620 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 E9PAM4 449 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 H7C417 338 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 MXD1Q05195 221 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 SF3A2Q15428 464 aaKnown RBP12.34□□□□□ -0.43
COL6A3-203ENST00000353578 ASRGL1Q7L266 308 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 SLC44A5Q8NCS7 719 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 SCGB1C1Q8TD33 95 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 TNFRSF25Q93038 417 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 TMEM203Q969S6 136 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 MCMBPQ9BTE3 642 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 RIOX1Q9H6W3 641 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 B3GNT2Q9NY97 397 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 ENPP5Q9UJA9 477 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 A3GALT2U3KPV4 340 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 SPATA31D1Q6ZQQ2 1576 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 MEGF6O75095 1541 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 A0A1W2PQ67 120 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 MT-ND1P03886 318 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 ILDR1Q86SU0 546 aaPredicted RBP12.34□□□□□ -0.43
COL6A3-203ENST00000353578 TXNDC15Q96J42 360 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 CCM2LQ9NUG4 571 aaPredicted RBP12.34□□□□□ -0.43
COL6A3-203ENST00000353578 CFAP97Q9P2B7 532 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 U3KQV3 271 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 BHMG1C9JSJ3 638 aaPredicted RBP12.34□□□□□ -0.43
COL6A3-203ENST00000353578 ENTPD3O75355 529 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 BMP1P13497 986 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 OR1E1P30953 314 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 GAD2Q05329 585 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 DNM1P34Q6PK57 102 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 OR7G3Q8NG95 312 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 C11orf16Q9NQ32 467 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 NAALAD2Q9Y3Q0 740 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 SCAF4O95104 1147 aaKnown RBP12.34□□□□□ -0.43
COL6A3-203ENST00000353578 PRPS1L1P21108 318 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 MECP2P51608 486 aaKnown RBP12.34□□□□□ -0.43
COL6A3-203ENST00000353578 CDH12P55289 794 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 ZNF467Q7Z7K2 595 aaPredicted RBP12.34□□□□□ -0.43
COL6A3-203ENST00000353578 TXNDC5Q8NBS9 432 aaKnown RBP12.34□□□□□ -0.43
COL6A3-203ENST00000353578 RADILQ96JH8 1075 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 SLC29A3Q9BZD2 475 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 TMEM185BQ9H7F4 350 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 KCNQ5Q9NR82 932 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 MICAL2O94851 1124 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 SLC16A8O95907 504 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 LAMP2P13473 410 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 TBX4P57082 545 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 FOXO4P98177 505 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 RNF212Q495C1 297 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 SPIN4Q56A73 249 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 STRADAQ7RTN6 431 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 PTERQ96BW5 349 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 RNF121Q9H920 327 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 TMLHEQ9NVH6 421 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 GADD45GO95257 159 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 CDK4P11802 303 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 CPN2P22792 545 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 LBHQ53QV2 105 aaPredicted RBP12.34□□□□□ -0.43
COL6A3-203ENST00000353578 DPPA2Q7Z7J5 298 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 ZFPM1Q8IX07 1006 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 TP63Q9H3D4 680 aaPredicted RBP12.34□□□□□ -0.43
COL6A3-203ENST00000353578 ELAC1Q9H777 363 aaKnown RBP12.34□□□□□ -0.43
COL6A3-203ENST00000353578 ABCC13Q9NSE7 274 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 A0A0D9SG52 128 aa12.34□□□□□ -0.43
COL6A3-203ENST00000353578 FLRT2O43155 660 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms