RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ANAPC2Q9UJX6 822 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 BLOC1S6Q9UL45 172 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 H3BM21 787 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 WNT9AO14904 365 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 PRAMEF4O60810 478 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 PRKACGP22612 351 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 GSSP48637 474 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 NFE2L1Q14494 772 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 PRAMEF9Q5VWM5 478 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 LYPLAL1Q5VWZ2 237 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 C11orf96Q7Z7L8 435 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 FAM124AQ86V42 546 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 DTWD1Q8N5C7 304 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 OR2T12Q8NG77 320 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 FNDC8Q8TC99 324 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 SUSD6Q92537 303 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 SGK2Q9HBY8 427 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 TM7SF3Q9NS93 570 aa13.51□□□□□ -0.25
TRIM4-201ENST00000349062 TRBV5-4A0A0C4DH59 114 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 A0A0G2JN53 185 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 A0A1W2PPW3 197 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 NOBOXO60393 691 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 RPS3P23396 243 aaKnown RBP eCLIP13.5□□□□□ -0.25
TRIM4-201ENST00000349062 RPS14P62263 151 aaKnown RBP13.5□□□□□ -0.25
TRIM4-201ENST00000349062 GTF2H3Q13889 308 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 ENPP6Q6UWR7 440 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 ERI1Q8IV48 349 aaKnown RBP13.5□□□□□ -0.25
TRIM4-201ENST00000349062 GLYATL1Q969I3 302 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 ECHDC3Q96DC8 303 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 MRGPRX3Q96LB0 322 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 EPB41L1Q9H4G0 881 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 EXD2Q9NVH0 621 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 ADGRE2Q9UHX3 823 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 TRPM6Q9BX84 2022 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 MYO1GB0I1T2 1018 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 MATN4O95460 622 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 ADH1CP00326 375 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 TGFB1P01137 390 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 BNIP3Q12983 259 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 PYCR3Q53H96 274 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.5□□□□□ -0.25
TRIM4-201ENST00000349062 CATSPEREQ5SY80 951 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 AGTRAPQ6RW13 159 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 UTS2BQ765I0 119 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 ADCK2Q7Z695 626 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 HID1Q8IV36 788 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 MINDY1Q8N5J2 469 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 BPIFB1Q8TDL5 484 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 FRS2Q8WU20 508 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 C12orf43Q96C57 262 aaKnown RBP13.5□□□□□ -0.25
TRIM4-201ENST00000349062 FAM120BQ96EK7 910 aaKnown RBP13.5□□□□□ -0.25
TRIM4-201ENST00000349062 DPH2Q9BQC3 489 aaPredicted RBP13.5□□□□□ -0.25
TRIM4-201ENST00000349062 SLC6A17Q9H1V8 727 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 TBC1D23Q9NUY8 699 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 PCDHA9Q9Y5H5 950 aa13.5□□□□□ -0.25
TRIM4-201ENST00000349062 EPORP19235 508 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 CDKN2CP42773 168 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 HSPA13P48723 471 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 ATP4BP51164 291 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 PHEXP78562 749 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 SPIDRQ14159 915 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 HKDC1Q2TB90 917 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 C1orf53Q5VUE5 145 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 TANGO2Q6ICL3 276 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 SZRD1Q7Z422 152 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 METTL3Q86U44 580 aaKnown RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 THOC6Q86W42 341 aaKnown RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 FAM20CQ8IXL6 584 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 C10orf111Q8N326 155 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 CELF5Q8N6W0 485 aaKnown RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 VN1R2Q8NFZ6 395 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 ASB11Q8WXH4 323 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 SH3KBP1Q96B97 665 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 ZNF707Q96C28 371 aaPredicted RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 FOPNLQ96NB1 174 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 GPATCH1Q9BRR8 931 aaKnown RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 ASF1AQ9Y294 204 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 NINQ8N4C6 2090 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 AP1G1O43747 822 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 ATG13O75143 517 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 OCM2P0CE71 109 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 OCMP0CE72 109 aaPredicted RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 COX7A2P14406 83 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 CLECL1Q8IZS7 167 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 VOPP1Q96AW1 172 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 CHFRQ96EP1 664 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 PDLIM5Q96HC4 596 aaKnown RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 OSBPL6Q9BZF3 934 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 PLGRKTQ9HBL7 147 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 SNX6Q9UNH7 406 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 RBMX2Q9Y388 322 aaKnown RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 EEDO75530 441 aaKnown RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 ZNF26P17031 533 aaPredicted RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 ZFP36L2P47974 494 aaKnown RBP13.49□□□□□ -0.25
TRIM4-201ENST00000349062 ACSM2AQ08AH3 577 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 DOC2AQ14183 400 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 ZNF234Q14588 700 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 ACSM2BQ68CK6 577 aa13.49□□□□□ -0.25
TRIM4-201ENST00000349062 PRMT9Q6P2P2 845 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms