RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 CASP9P55211 416 aa17.37■□□□□ 0.37
APP-202ENST00000348990 CAMK2GQ13555 558 aaPredicted RBP17.37■□□□□ 0.37
APP-202ENST00000348990 TAF1AQ15573 450 aaPredicted RBP17.37■□□□□ 0.37
APP-202ENST00000348990 PARP15Q460N3 678 aa17.37■□□□□ 0.37
APP-202ENST00000348990 ZC3H12BQ5HYM0 836 aaKnown RBP17.37■□□□□ 0.37
APP-202ENST00000348990 GLB1L3Q8NCI6 653 aaPredicted RBP17.37■□□□□ 0.37
APP-202ENST00000348990 ZNF566Q969W8 418 aa17.37■□□□□ 0.37
APP-202ENST00000348990 TTPALQ9BTX7 342 aa17.37■□□□□ 0.37
APP-202ENST00000348990 BEX2Q9BXY8 128 aa17.37■□□□□ 0.37
APP-202ENST00000348990 PRDM5Q9NQX1 630 aaPredicted RBP17.37■□□□□ 0.37
APP-202ENST00000348990 GIMAP4Q9NUV9 329 aa17.37■□□□□ 0.37
APP-202ENST00000348990 GPR83Q9NYM4 423 aa17.37■□□□□ 0.37
APP-202ENST00000348990 GPRC5BQ9NZH0 403 aa17.37■□□□□ 0.37
APP-202ENST00000348990 UBA2Q9UBT2 640 aaPredicted RBP17.37■□□□□ 0.37
APP-202ENST00000348990 RAPGEFL1Q9UHV5 662 aa17.37■□□□□ 0.37
APP-202ENST00000348990 PRG3Q9Y2Y8 225 aaPredicted RBP17.37■□□□□ 0.37
APP-202ENST00000348990 CTDSP2O14595 271 aa17.36■□□□□ 0.37
APP-202ENST00000348990 C1QCP02747 245 aa17.36■□□□□ 0.37
APP-202ENST00000348990 JUNDP17535 347 aa17.36■□□□□ 0.37
APP-202ENST00000348990 MZF1P28698 734 aaPredicted RBP17.36■□□□□ 0.37
APP-202ENST00000348990 DGKEP52429 567 aa17.36■□□□□ 0.37
APP-202ENST00000348990 INO80DQ53TQ3 878 aaPredicted RBP17.36■□□□□ 0.37
APP-202ENST00000348990 ATG9BQ674R7 924 aa17.36■□□□□ 0.37
APP-202ENST00000348990 ATAD1Q8NBU5 361 aa17.36■□□□□ 0.37
APP-202ENST00000348990 MYEOVQ96EZ4 313 aa17.36■□□□□ 0.37
APP-202ENST00000348990 HSH2DQ96JZ2 352 aa17.36■□□□□ 0.37
APP-202ENST00000348990 APOLD1Q96LR9 279 aa17.36■□□□□ 0.37
APP-202ENST00000348990 CENPOQ9BU64 300 aa17.36■□□□□ 0.37
APP-202ENST00000348990 AP5M1Q9H0R1 490 aa17.36■□□□□ 0.37
APP-202ENST00000348990 ELOVL6Q9H5J4 265 aa17.36■□□□□ 0.37
APP-202ENST00000348990 MAGIXQ9H6Y5 334 aa17.36■□□□□ 0.37
APP-202ENST00000348990 TM9SF3Q9HD45 589 aa17.36■□□□□ 0.37
APP-202ENST00000348990 ARIH1Q9Y4X5 557 aaPredicted RBP17.36■□□□□ 0.37
APP-202ENST00000348990 LTBP3Q9NS15 1303 aa17.36■□□□□ 0.37
APP-202ENST00000348990 PNMA8CA0A1B0GUJ8 204 aa17.36■□□□□ 0.37
APP-202ENST00000348990 SCAMP3O14828 347 aaKnown RBP17.36■□□□□ 0.37
APP-202ENST00000348990 ERN1O75460 977 aaKnown RBP17.36■□□□□ 0.37
APP-202ENST00000348990 ABCB1P08183 1280 aaPredicted RBP17.36■□□□□ 0.37
APP-202ENST00000348990 POU2F1P14859 743 aa17.36■□□□□ 0.37
APP-202ENST00000348990 RPL9P32969 192 aaKnown RBP17.36■□□□□ 0.37
APP-202ENST00000348990 SLC15A1P46059 708 aa17.36■□□□□ 0.37
APP-202ENST00000348990 DDX39BQ13838 428 aaKnown RBP17.36■□□□□ 0.37
APP-202ENST00000348990 KEAP1Q14145 624 aa17.36■□□□□ 0.37
APP-202ENST00000348990 PNCKQ6P2M8 343 aa17.36■□□□□ 0.37
APP-202ENST00000348990 FAM151BQ6UXP7 276 aa17.36■□□□□ 0.37
APP-202ENST00000348990 ZNF605Q86T29 641 aa17.36■□□□□ 0.37
APP-202ENST00000348990 TEX26Q8N6G2 289 aa17.36■□□□□ 0.37
APP-202ENST00000348990 IPCEF1Q8WWN9 437 aaPredicted RBP17.36■□□□□ 0.37
APP-202ENST00000348990 MYDGFQ969H8 173 aa17.36■□□□□ 0.37
APP-202ENST00000348990 EGLN2Q96KS0 407 aa17.36■□□□□ 0.37
APP-202ENST00000348990 TMEM246Q9BRR3 403 aa17.36■□□□□ 0.37
APP-202ENST00000348990 BTBD2Q9BX70 525 aa17.36■□□□□ 0.37
APP-202ENST00000348990 EBPLQ9BY08 206 aa17.36■□□□□ 0.37
APP-202ENST00000348990 FAM126AQ9BYI3 521 aaPredicted RBP17.36■□□□□ 0.37
APP-202ENST00000348990 DLGAP4Q9Y2H0 992 aa17.36■□□□□ 0.37
APP-202ENST00000348990 CLDN24A6NM45 220 aa17.36■□□□□ 0.37
APP-202ENST00000348990 AP3D1O14617 1153 aa17.36■□□□□ 0.37
APP-202ENST00000348990 HAT1O14929 419 aa17.36■□□□□ 0.37
APP-202ENST00000348990 PRAMEF11O60813 436 aa17.36■□□□□ 0.37
APP-202ENST00000348990 EPOP01588 193 aa17.36■□□□□ 0.37
APP-202ENST00000348990 EPB42P16452 691 aa17.36■□□□□ 0.37
APP-202ENST00000348990 TGFBR2P37173 567 aa17.36■□□□□ 0.37
APP-202ENST00000348990 AGAP6Q5VW22 663 aa17.36■□□□□ 0.37
APP-202ENST00000348990 LINGO4Q6UY18 593 aa17.36■□□□□ 0.37
APP-202ENST00000348990 NLGN4XQ8N0W4 816 aa17.36■□□□□ 0.37
APP-202ENST00000348990 ASCC1Q8N9N2 400 aaKnown RBP17.36■□□□□ 0.37
APP-202ENST00000348990 ZNF675Q8TD23 568 aa17.36■□□□□ 0.37
APP-202ENST00000348990 AGAP4Q96P64 663 aa17.36■□□□□ 0.37
APP-202ENST00000348990 QPCTLQ9NXS2 382 aa17.36■□□□□ 0.37
APP-202ENST00000348990 OGDHLQ9ULD0 1010 aa17.36■□□□□ 0.37
APP-202ENST00000348990 KCNH4Q9UQ05 1017 aa17.36■□□□□ 0.37
APP-202ENST00000348990 RAI2Q9Y5P3 530 aa17.36■□□□□ 0.37
APP-202ENST00000348990 TRIP12Q14669 1992 aaPredicted RBP17.35■□□□□ 0.37
APP-202ENST00000348990 PABPN1LA6NDY0 278 aaKnown RBP17.35■□□□□ 0.37
APP-202ENST00000348990 F5H5T6 163 aa17.35■□□□□ 0.37
APP-202ENST00000348990 PDHXO00330 501 aa17.35■□□□□ 0.37
APP-202ENST00000348990 CCRL2O00421 344 aa17.35■□□□□ 0.37
APP-202ENST00000348990 CCNDBP1O95273 360 aa17.35■□□□□ 0.37
APP-202ENST00000348990 POU1F1P28069 291 aa17.35■□□□□ 0.37
APP-202ENST00000348990 ARPC4P59998 168 aa17.35■□□□□ 0.37
APP-202ENST00000348990 ZNF45Q02386 682 aa17.35■□□□□ 0.37
APP-202ENST00000348990 BCL7AQ4VC05 210 aa17.35■□□□□ 0.37
APP-202ENST00000348990 USP39Q53GS9 565 aaKnown RBP17.35■□□□□ 0.37
APP-202ENST00000348990 CAPN13Q6MZZ7 669 aaPredicted RBP17.35■□□□□ 0.37
APP-202ENST00000348990 SNX20Q7Z614 316 aa17.35■□□□□ 0.37
APP-202ENST00000348990 GALNT12Q8IXK2 581 aa17.35■□□□□ 0.37
APP-202ENST00000348990 KLHDC9Q8NEP7 349 aa17.35■□□□□ 0.37
APP-202ENST00000348990 C1QTNF3Q9BXJ4 246 aa17.35■□□□□ 0.37
APP-202ENST00000348990 PRRG3Q9BZD7 231 aa17.35■□□□□ 0.37
APP-202ENST00000348990 A0A1W2PQ67 120 aa17.35■□□□□ 0.37
APP-202ENST00000348990 KRT87PA6NCN2 255 aa17.35■□□□□ 0.37
APP-202ENST00000348990 WASH4PA8MWX3 477 aa17.35■□□□□ 0.37
APP-202ENST00000348990 FAM220BPB1ANY3 271 aa17.35■□□□□ 0.37
APP-202ENST00000348990 TACR1P25103 407 aa17.35■□□□□ 0.37
APP-202ENST00000348990 CXCR4P61073 352 aa17.35■□□□□ 0.37
APP-202ENST00000348990 FAM214AQ32MH5 1076 aa17.35■□□□□ 0.37
APP-202ENST00000348990 PROX2Q3B8N5 592 aa17.35■□□□□ 0.37
APP-202ENST00000348990 ATAD3CQ5T2N8 411 aa17.35■□□□□ 0.37
APP-202ENST00000348990 FAM171A1Q5VUB5 890 aa17.35■□□□□ 0.37
APP-202ENST00000348990 KDM4DQ6B0I6 523 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms