RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 XKP51811 444 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 DPYSL2Q16555 572 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 QPCTQ16769 361 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 ZSCAN4Q8NAM6 433 aaPredicted RBP22.59■■□□□ 1.21
NPAS3-201ENST00000346562 GATA5Q9BWX5 397 aaPredicted RBP22.59■■□□□ 1.21
NPAS3-201ENST00000346562 USP29Q9HBJ7 922 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 MID1O15344 667 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 ORC5O43913 435 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 MT-ND1P03886 318 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 EIF5AP63241 154 aaKnown RBP22.59■■□□□ 1.21
NPAS3-201ENST00000346562 PDE12Q6L8Q7 609 aaKnown RBP22.59■■□□□ 1.21
NPAS3-201ENST00000346562 ZNF554Q86TJ5 538 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 C12orf40Q86WS4 652 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 TTYH1Q9H313 450 aaPredicted RBP22.59■■□□□ 1.21
NPAS3-201ENST00000346562 ELAC1Q9H777 363 aaKnown RBP22.59■■□□□ 1.21
NPAS3-201ENST00000346562 EURLQ9NYK6 297 aa22.59■■□□□ 1.21
NPAS3-201ENST00000346562 PCDHGA12O60330 932 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 IFNL1Q8IU54 200 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 TMEM156Q8N614 296 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 TOP1MTQ969P6 601 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 PCDHGB2Q9Y5G2 931 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 TCRBV7S2A1N4TA0A589 114 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 ATP1B2P14415 290 aaPredicted RBP22.58■■□□□ 1.21
NPAS3-201ENST00000346562 SEPHS1P49903 392 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 FAM189A2Q15884 450 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 SCAMP5Q8TAC9 235 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 FZD8Q9H461 694 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 ZNF536O15090 1300 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 ERI3O43414 337 aaKnown RBP22.58■■□□□ 1.21
NPAS3-201ENST00000346562 ZNF30P17039 623 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 PRPF38BQ5VTL8 546 aaKnown RBP22.58■■□□□ 1.21
NPAS3-201ENST00000346562 CYP2S1Q96SQ9 504 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 ZNF446Q9NWS9 450 aa22.58■■□□□ 1.21
NPAS3-201ENST00000346562 A0A0J9YVX5 310 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 MTPNP58546 118 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 HGSNATQ68CP4 663 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 CCDC107Q8WV48 283 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 SUSD3Q96L08 255 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 MARCH7Q9H992 704 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 WASF3Q9UPY6 502 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 TNFRSF10BO14763 440 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 GPR68Q15743 365 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 CLEC20AQ6ZU45 233 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 PCDH19Q8TAB3 1148 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.58■■□□□ 1.2
NPAS3-201ENST00000346562 KAT8Q9H7Z6 458 aaKnown RBP22.58■■□□□ 1.2
NPAS3-201ENST00000346562 DTLQ9NZJ0 730 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 COL20A1Q9P218 1284 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 DKKL1Q9UK85 242 aa22.58■■□□□ 1.2
NPAS3-201ENST00000346562 ARRB1P49407 418 aaPredicted RBP22.57■■□□□ 1.2
NPAS3-201ENST00000346562 CLIP4Q8N3C7 705 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 APOBEC3GQ9HC16 384 aaKnown RBP22.57■■□□□ 1.2
NPAS3-201ENST00000346562 SLC2A4RGQ9NR83 387 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.57■■□□□ 1.2
NPAS3-201ENST00000346562 HAS3O00219 553 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 OR7A10O76100 309 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 IMPDH1P20839 514 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 EVX2Q03828 476 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 DECR1Q16698 335 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 ARHGAP9Q9BRR9 750 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 SYT17Q9BSW7 474 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 Q9N2J8 555 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 C9IYK1 514 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 MUSKO15146 869 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 MTHFD1P11586 935 aaKnown RBP22.57■■□□□ 1.2
NPAS3-201ENST00000346562 MAGP20916 626 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 GJA9P57773 515 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 ANKRA2Q9H9E1 313 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 TTC34A8MYJ7 566 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 ZNF234Q14588 700 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 RNF19BQ6ZMZ0 732 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 OR10G2Q8NGC3 310 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 CYB5D2Q8WUJ1 264 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 COPS4Q9BT78 406 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 TMEM109Q9BVC6 243 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 ASPNQ9BXN1 380 aa22.57■■□□□ 1.2
NPAS3-201ENST00000346562 IGLV3-22A0A075B6J6 115 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 S100A1P23297 94 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 FUT2Q10981 343 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 Q9Y3F1 56 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 PRKCGP05129 697 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 CAPZA1P52907 286 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 ARFRP1Q13795 201 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 CRB2Q5IJ48 1285 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 FAM46DQ8NEK8 389 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 OR2L8Q8NGY9 312 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 LMX1AQ8TE12 382 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 ADAD1Q96M93 576 aaKnown RBP22.56■■□□□ 1.2
NPAS3-201ENST00000346562 FEM1AQ9BSK4 669 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 SLC32A1Q9H598 525 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 ZNF99A8MXY4 864 aaPredicted RBP22.56■■□□□ 1.2
NPAS3-201ENST00000346562 CDC7O00311 574 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 CA9Q16790 459 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 FRMD7Q6ZUT3 714 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 LINC00471Q8N535 108 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 OR13C4Q8NGS5 318 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 OSBPL2Q9H1P3 480 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 METTL7AQ9H8H3 244 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 FZD4Q9ULV1 537 aa22.56■■□□□ 1.2
NPAS3-201ENST00000346562 FABP12A6NFH5 140 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms