RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 TEX37Q96LM6 180 aa24.47■■□□□ 1.51
TRADD-201ENST00000345057 EFCAB11Q9BUY7 163 aa24.47■■□□□ 1.51
TRADD-201ENST00000345057 BTBD1Q9H0C5 482 aa24.47■■□□□ 1.51
TRADD-201ENST00000345057 TRIT1Q9H3H1 467 aaKnown RBP24.47■■□□□ 1.51
TRADD-201ENST00000345057 BRF2Q9HAW0 419 aa24.47■■□□□ 1.51
TRADD-201ENST00000345057 MAP10Q9P2G4 905 aa24.47■■□□□ 1.51
TRADD-201ENST00000345057 ATG2BQ96BY7 2078 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 TCRBV21S2A2A0A5A6 115 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 KANSL1LA0AUZ9 987 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 ANKRD28O15084 1053 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 PRAMEF4O60810 478 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 ZFP36L2P47974 494 aaKnown RBP24.46■■□□□ 1.51
TRADD-201ENST00000345057 TAP2Q03519 686 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 PRAMEF9Q5VWM5 478 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 LAYNQ6UX15 382 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 LPCAT2Q7L5N7 544 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 ASB9Q96DX5 294 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 WDR34Q96EX3 536 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 GPATCH1Q9BRR8 931 aaKnown RBP24.46■■□□□ 1.51
TRADD-201ENST00000345057 DPY30Q9C005 99 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 SGK2Q9HBY8 427 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 SPATA7Q9P0W8 599 aa24.46■■□□□ 1.51
TRADD-201ENST00000345057 C15orf38-AP3S2A0A0A6YYH1 394 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 CEACAM5P06731 702 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 VARSP26640 1264 aaKnown RBP24.45■■□□□ 1.51
TRADD-201ENST00000345057 MAT2AP31153 395 aaKnown RBP24.45■■□□□ 1.51
TRADD-201ENST00000345057 GCKP35557 465 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 KIAA1024LP59773 190 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 LAPTM5Q13571 262 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 NFYCQ13952 458 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 CCNIQ14094 377 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 SMAD2Q15796 467 aaKnown RBP24.45■■□□□ 1.51
TRADD-201ENST00000345057 TMEM92Q6UXU6 159 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 CHST15Q7LFX5 561 aaPredicted RBP24.45■■□□□ 1.51
TRADD-201ENST00000345057 ARPINQ7Z6K5 226 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 FAM124AQ86V42 546 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 TBC1D21Q8IYX1 336 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 EFCAB3Q8N7B9 438 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 WDR20Q8TBZ3 569 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 SLC26A7Q8TE54 656 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 LRRC58Q96CX6 371 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 HAUS8Q9BT25 410 aa24.45■■□□□ 1.51
TRADD-201ENST00000345057 POLMQ9NP87 494 aaPredicted RBP24.45■■□□□ 1.51
TRADD-201ENST00000345057 FPGTO14772 594 aa24.45■■□□□ 1.5
TRADD-201ENST00000345057 SLC31A1O15431 190 aa24.45■■□□□ 1.5
TRADD-201ENST00000345057 NARSO43776 548 aaKnown RBP24.45■■□□□ 1.5
TRADD-201ENST00000345057 STAMBPO95630 424 aa24.45■■□□□ 1.5
TRADD-201ENST00000345057 KIAA0040Q15053 153 aa24.45■■□□□ 1.5
TRADD-201ENST00000345057 HIST2H2ACQ16777 129 aaPredicted RBP24.45■■□□□ 1.5
TRADD-201ENST00000345057 ATG9BQ674R7 924 aa24.45■■□□□ 1.5
TRADD-201ENST00000345057 HIST2H2AA3Q6FI13 130 aa24.45■■□□□ 1.5
TRADD-201ENST00000345057 GPR153Q6NV75 609 aa24.45■■□□□ 1.5
TRADD-201ENST00000345057 SLCO4C1Q6ZQN7 724 aa24.45■■□□□ 1.5
TRADD-201ENST00000345057 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.45■■□□□ 1.5
TRADD-201ENST00000345057 LIX1Q8N485 282 aa24.45■■□□□ 1.5
TRADD-201ENST00000345057 SPDYE1Q8NFV5 336 aaPredicted RBP24.45■■□□□ 1.5
TRADD-201ENST00000345057 S100A14Q9HCY8 104 aa24.45■■□□□ 1.5
TRADD-201ENST00000345057 ABCD2Q9UBJ2 740 aa24.45■■□□□ 1.5
TRADD-201ENST00000345057 CIDEBQ9UHD4 219 aa24.45■■□□□ 1.5
TRADD-201ENST00000345057 SORBS2O94875 1100 aaKnown RBP24.44■■□□□ 1.5
TRADD-201ENST00000345057 ACP5P13686 325 aa24.44■■□□□ 1.5
TRADD-201ENST00000345057 NPPBP16860 134 aa24.44■■□□□ 1.5
TRADD-201ENST00000345057 TPMTP51580 245 aa24.44■■□□□ 1.5
TRADD-201ENST00000345057 NEK2P51955 445 aa24.44■■□□□ 1.5
TRADD-201ENST00000345057 CLNS1AP54105 237 aaKnown RBP24.44■■□□□ 1.5
TRADD-201ENST00000345057 PPP2CBP62714 309 aa24.44■■□□□ 1.5
TRADD-201ENST00000345057 PPP2CAP67775 309 aa24.44■■□□□ 1.5
TRADD-201ENST00000345057 TRAP1Q12931 704 aaKnown RBP24.44■■□□□ 1.5
TRADD-201ENST00000345057 TRIM25Q14258 630 aaKnown RBP24.44■■□□□ 1.5
TRADD-201ENST00000345057 USP39Q53GS9 565 aaKnown RBP24.44■■□□□ 1.5
TRADD-201ENST00000345057 MED27Q6P2C8 311 aa24.44■■□□□ 1.5
TRADD-201ENST00000345057 LRRC56Q8IYG6 542 aaPredicted RBP24.44■■□□□ 1.5
TRADD-201ENST00000345057 DPP10Q8N608 796 aa24.44■■□□□ 1.5
TRADD-201ENST00000345057 OR5AR1Q8NGP9 310 aa24.44■■□□□ 1.5
TRADD-201ENST00000345057 NEIL2Q969S2 332 aa24.44■■□□□ 1.5
TRADD-201ENST00000345057 SCARF2Q96GP6 870 aaPredicted RBP24.44■■□□□ 1.5
TRADD-201ENST00000345057 PCBD2Q9H0N5 130 aa24.44■■□□□ 1.5
TRADD-201ENST00000345057 ACTL8Q9H568 366 aa24.44■■□□□ 1.5
TRADD-201ENST00000345057 TM7SF3Q9NS93 570 aa24.44■■□□□ 1.5
TRADD-201ENST00000345057 BCAS2O75934 225 aaPredicted RBP24.43■■□□□ 1.5
TRADD-201ENST00000345057 IL6P05231 212 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 XRCC1P18887 633 aaPredicted RBP24.43■■□□□ 1.5
TRADD-201ENST00000345057 CD22P20273 847 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 IL12AP29459 219 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 TIGD2Q4W5G0 525 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 CAPRIN2Q6IMN6 1127 aaKnown RBP24.43■■□□□ 1.5
TRADD-201ENST00000345057 LCTLQ6UWM7 567 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 TMPRSS11BQ86T26 416 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 SLC5A11Q8WWX8 675 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 UBE2E3Q969T4 207 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 VPS33AQ96AX1 596 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 ANKRD27Q96NW4 1050 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 EBF2Q9HAK2 575 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 NMRK1Q9NWW6 199 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 VPS29Q9UBQ0 182 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 PSMD13Q9UNM6 376 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 C9JVG2 144 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 ANP32DO95626 131 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 ERGP11308 486 aa24.43■■□□□ 1.5
TRADD-201ENST00000345057 BCKDHAP12694 445 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms