RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 RHEBL1Q8TAI7 183 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 ZNF480Q8WV37 535 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 KLHL6Q8WZ60 621 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 N4BP2L2Q92802 583 aaPredicted RBP11.43□□□□□ -0.58
SNCA-202ENST00000345009 ISL2Q96A47 359 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 ZUFSPQ96AP4 578 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 TCTN2Q96GX1 697 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 IL17FQ96PD4 163 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 OR2A14Q96R47 310 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 MAP3K3Q99759 626 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 HAUS8Q9BT25 410 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 MENTQ9BUN1 341 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 PITPNM3Q9BZ71 974 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 ASPSCR1Q9BZE9 553 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 FANCEQ9HB96 536 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 PDE7BQ9NP56 450 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 CCDC177Q9NQR7 707 aaPredicted RBP11.43□□□□□ -0.58
SNCA-202ENST00000345009 SOHLH2Q9NX45 425 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 SEMA5BQ9P283 1151 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 TBK1Q9UHD2 729 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 LOXL2Q9Y4K0 774 aa11.43□□□□□ -0.58
SNCA-202ENST00000345009 TPRP12270 2363 aaKnown RBP11.42□□□□□ -0.58
SNCA-202ENST00000345009 TRABD2BA6NFA1 517 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 SLC9B1P1A6NJY1 282 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 SMIM23A6NLE4 172 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 EFCAB7A8K855 629 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 B4E171 279 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 TARM1B6A8C7 271 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 E7ENX8 843 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 CASC3O15234 703 aaKnown RBP11.42□□□□□ -0.58
SNCA-202ENST00000345009 WISP3O95389 354 aaPredicted RBP11.42□□□□□ -0.58
SNCA-202ENST00000345009 GUCA1CO95843 209 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 SHBGP04278 402 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 ERGP11308 486 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 TFEBP19484 476 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 HRH2P25021 359 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 GCAP28676 217 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 TSPAN7P41732 249 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 SLCO1A2P46721 670 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 PDX1P52945 283 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 GABREP78334 506 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 ACY1Q03154 408 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 TAP2Q03519 686 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 IL11RAQ14626 422 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 C16orf72Q14CZ0 275 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 RTP5Q14D33 572 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 PHKG1Q16816 387 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 SULT1C3Q6IMI6 304 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 SBSNQ6UWP8 590 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 ISCA2Q86U28 154 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 TAX1BP1Q86VP1 789 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 LMNTD1Q8N9Z9 388 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 LINC01555Q8NAE3 123 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 DENND1AQ8TEH3 1009 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 HNRNPLLQ8WVV9 542 aaKnown RBP11.42□□□□□ -0.58
SNCA-202ENST00000345009 DLG3Q92796 817 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 FBXL8Q96CD0 374 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 MED8Q96G25 268 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 SLC41A2Q96JW4 573 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 SCYL1Q96KG9 808 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 TAAR9Q96RI9 348 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 MIPEPQ99797 713 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 ZPBPQ9BS86 351 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 FAM117AQ9C073 453 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 B3GNT4Q9C0J1 378 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 ALG9Q9H6U8 611 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 FBXO8Q9NRD0 319 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 SLC39A1Q9NY26 324 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 SPHK1Q9NYA1 384 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 CD274Q9NZQ7 290 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 STOX2Q9P2F5 926 aaPredicted RBP11.42□□□□□ -0.58
SNCA-202ENST00000345009 DCDC2Q9UHG0 476 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 TMCO1Q9UM00 188 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 SATB2Q9UPW6 733 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 WASF3Q9UPY6 502 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 PLAAQ9Y263 795 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 PCM1Q15154 2024 aa11.42□□□□□ -0.58
SNCA-202ENST00000345009 IGHV5-51A0A0C4DH38 117 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 MED19A0JLT2 244 aaPredicted RBP11.41□□□□□ -0.58
SNCA-202ENST00000345009 POLR1CO15160 346 aaPredicted RBP11.41□□□□□ -0.58
SNCA-202ENST00000345009 CTIFO43310 598 aaKnown RBP11.41□□□□□ -0.58
SNCA-202ENST00000345009 KERAO60938 352 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 IPO13O94829 963 aaKnown RBP11.41□□□□□ -0.58
SNCA-202ENST00000345009 TNFSF15O95150 251 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 TOP3BO95985 862 aaKnown RBP11.41□□□□□ -0.58
SNCA-202ENST00000345009 GSTA1P08263 222 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 SPINK2P20155 84 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 IMPA1P29218 277 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 MAGEA12P43365 314 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 CCT5P48643 541 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 PPP1CAP62136 330 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 MC2RQ01718 297 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 PRDX1Q06830 199 aaKnown RBP11.41□□□□□ -0.58
SNCA-202ENST00000345009 FOXM1Q08050 763 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 NAE1Q13564 534 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 TGFBIQ15582 683 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 PPP1R3AQ16821 1122 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 ZC3H12BQ5HYM0 836 aaKnown RBP11.41□□□□□ -0.58
SNCA-202ENST00000345009 DCAF12Q5T6F0 453 aa11.41□□□□□ -0.58
SNCA-202ENST00000345009 IGF2-ASQ6U949 168 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms