RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 GBP5Q96PP8 586 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 GPR21Q99679 349 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 FAM167BQ9BTA0 163 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 AARSD1Q9BTE6 412 aaKnown RBP13.86□□□□□ -0.19
HMGN3-202ENST00000344726 RAB11FIP5Q9BXF6 653 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 NLNQ9BYT8 704 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 CLMPQ9H6B4 373 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 EURLQ9NYK6 297 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 SPATA7Q9P0W8 599 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.86□□□□□ -0.19
HMGN3-202ENST00000344726 SLC17A6Q9P2U8 582 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 DHCR7Q9UBM7 475 aaKnown RBP13.86□□□□□ -0.19
HMGN3-202ENST00000344726 TCFL5Q9UL49 500 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 PLCL2Q9UPR0 1127 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 DHRS7Q9Y394 339 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.86□□□□□ -0.19
HMGN3-202ENST00000344726 NUP210LQ5VU65 1888 aa13.86□□□□□ -0.19
HMGN3-202ENST00000344726 DOCK10Q96BY6 2186 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 ARGFXA6NJG6 315 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 MYO1CO00159 1063 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 ZSCAN9O15535 394 aaPredicted RBP13.85□□□□□ -0.19
HMGN3-202ENST00000344726 CTSVO60911 334 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 HBQ1P09105 142 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 CASRP41180 1078 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 ELK3P41970 407 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 CSRP3P50461 194 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 ITGA8P53708 1063 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 MORF4L2Q15014 288 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 TCTN3Q6NUS6 607 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 CYHR1Q6ZMK1 362 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 SYDE1Q6ZW31 735 aaPredicted RBP13.85□□□□□ -0.19
HMGN3-202ENST00000344726 NEK10Q6ZWH5 1172 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 MCATQ8IVS2 390 aaKnown RBP13.85□□□□□ -0.19
HMGN3-202ENST00000344726 OR2L3Q8NG85 312 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 OR2A1Q8NGT9 310 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 OR9A1PQ8NGU1 263 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 PKP4Q99569 1192 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 NDNQ99608 321 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 MIPEPQ99797 713 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 SLC7A5P2Q9GIP4 190 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 KLHL42Q9P2K6 505 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 MRFAP1Q9Y605 127 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 AP1M2Q9Y6Q5 423 aa13.85□□□□□ -0.19
HMGN3-202ENST00000344726 FLNCQ14315 2725 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 CCDC188H7C350 402 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 CNOT3O75175 753 aaKnown RBP13.84□□□□□ -0.19
HMGN3-202ENST00000344726 KLF7O75840 302 aaPredicted RBP13.84□□□□□ -0.19
HMGN3-202ENST00000344726 SEC31AO94979 1220 aaKnown RBP13.84□□□□□ -0.19
HMGN3-202ENST00000344726 TTC4O95801 387 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 ITGAXP20702 1163 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 MCM3P25205 808 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 MRPS25P82663 173 aaKnown RBP13.84□□□□□ -0.19
HMGN3-202ENST00000344726 KCNC4Q03721 635 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 NCF4Q15080 339 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 IGFBP7Q16270 282 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 TTLL9Q3SXZ7 439 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 SPANXN3Q5MJ09 141 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 RBM20Q5T481 1227 aaKnown RBP13.84□□□□□ -0.19
HMGN3-202ENST00000344726 TLDC1Q6P9B6 456 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 TRMT10BQ6PF06 316 aaKnown RBP13.84□□□□□ -0.19
HMGN3-202ENST00000344726 SUSD1Q6UWL2 747 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 PIWIL4Q7Z3Z4 852 aaKnown RBP13.84□□□□□ -0.19
HMGN3-202ENST00000344726 CNTN4Q8IWV2 1026 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 CPNE9Q8IYJ1 553 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 MAGEC3Q8TD91 643 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 ASB11Q8WXH4 323 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 THAP4Q8WY91 577 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 INPP5DQ92835 1189 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 CERS2Q96G23 380 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 RUNDC3BQ96NL0 473 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 KRT12Q99456 494 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 DPH2Q9BQC3 489 aaPredicted RBP13.84□□□□□ -0.19
HMGN3-202ENST00000344726 ACAT2Q9BWD1 397 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 TRIM31Q9BZY9 425 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 CCDC68Q9H2F9 335 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 ANAPC2Q9UJX6 822 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 SNX7Q9UNH6 387 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 CHMP2BQ9UQN3 213 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 KLK4Q9Y5K2 254 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 COMMD10Q9Y6G5 202 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 TEX264Q9Y6I9 313 aa13.84□□□□□ -0.19
HMGN3-202ENST00000344726 COL12A1Q99715 3063 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 MKRN2OSH3BPM6 223 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 GFYI3L273 518 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 FKBP9O95302 570 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 SLC16A8O95907 504 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 AHSGP02765 367 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 CATP04040 527 aaKnown RBP13.83□□□□□ -0.2
HMGN3-202ENST00000344726 MPC1LP0DKB6 136 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 PAFAH1B1P43034 410 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 RPL21P46778 160 aaKnown RBP13.83□□□□□ -0.2
HMGN3-202ENST00000344726 CARSP49589 748 aaKnown RBP13.83□□□□□ -0.2
HMGN3-202ENST00000344726 PGGT1BP53609 377 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 CDKN2DP55273 166 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 SLC9A5Q14940 896 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 TEDDM1Q5T9Z0 273 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 STEAP4Q687X5 459 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 FRMPD2BQ6IN97 320 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 ASB18Q6ZVZ8 466 aa13.83□□□□□ -0.2
HMGN3-202ENST00000344726 PDIK1LQ8N165 341 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms