RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 A0A1B0GVI7 797 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 PRAMEF22A3QJZ6 481 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 HTR1AP08908 422 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 PRKAR1BP31321 381 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 DPY19L1Q2PZI1 675 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 CUZD1Q86UP6 607 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 NR4A3Q92570 626 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 MSI2Q96DH6 328 aaKnown RBP17.27■□□□□ 0.36
SMAD4-201ENST00000342988 OSMRQ99650 979 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 SEMA3CQ99985 751 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 RHOJQ9H4E5 214 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 KLHL13Q9P2N7 655 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 C8GP07360 202 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 CRHR1P34998 444 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 CRISP3P54108 245 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 FCRL2Q96LA5 508 aaPredicted RBP17.27■□□□□ 0.36
SMAD4-201ENST00000342988 MRPL45Q9BRJ2 306 aaKnown RBP17.27■□□□□ 0.36
SMAD4-201ENST00000342988 SEC61A2Q9H9S3 476 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 ZNF334Q9HCZ1 680 aaPredicted RBP17.27■□□□□ 0.36
SMAD4-201ENST00000342988 HNRNPLP14866 589 aaKnown RBP eCLIP17.27■□□□□ 0.362e-7■■□□□ 14.5
SMAD4-201ENST00000342988 CD79BP40259 229 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 CCNFP41002 786 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 ENTPD1P49961 510 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 TAS2R39P59534 338 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 NCEH1Q6PIU2 408 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 ERN2Q76MJ5 926 aaKnown RBP17.27■□□□□ 0.36
SMAD4-201ENST00000342988 OR7G1Q8NGA0 311 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 SNAPC3Q92966 411 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 H3BRB1 525 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 TPST2O60704 377 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 CD36P16671 472 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 SH3D19Q5HYK7 790 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 CCDC71Q8IV32 467 aaPredicted RBP17.27■□□□□ 0.36
SMAD4-201ENST00000342988 ARL5BQ96KC2 179 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 TUT1Q9H6E5 874 aaKnown RBP17.27■□□□□ 0.36
SMAD4-201ENST00000342988 P2RX2Q9UBL9 471 aa17.27■□□□□ 0.36
SMAD4-201ENST00000342988 SLC22A2O15244 555 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 MPPED1O15442 326 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 ATP6V1G1O75348 118 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 WDPCPO95876 746 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 CD72P21854 359 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 BMP8BP34820 402 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 SREBF1P36956 1147 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 FNTBP49356 437 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 CASP6P55212 293 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 CRADDP78560 199 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 MOB1BQ7L9L4 216 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 BMP8AQ7Z5Y6 402 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 GPR149Q86SP6 731 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 MED14O60244 1454 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 A0A1W2PQ45 241 aaPredicted RBP17.27■□□□□ 0.35
SMAD4-201ENST00000342988 A0A1W2PQY0 241 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 TM9SF4Q92544 642 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 TMEM41AQ96HV5 264 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 UBXN10Q96LJ8 280 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 ARMC1Q9NVT9 282 aa17.27■□□□□ 0.35
SMAD4-201ENST00000342988 OR2AG2A6NM03 316 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 CAMK2DQ13557 499 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 ZNF571Q7Z3V5 609 aaPredicted RBP17.26■□□□□ 0.35
SMAD4-201ENST00000342988 ZDHHC21Q8IVQ6 265 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 AENQ8WTP8 325 aaKnown RBP17.26■□□□□ 0.35
SMAD4-201ENST00000342988 NSUN4Q96CB9 384 aaKnown RBP17.26■□□□□ 0.35
SMAD4-201ENST00000342988 ZNF286AQ9HBT8 521 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 CD3GP09693 182 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 ZNF143P52747 638 aaPredicted RBP17.26■□□□□ 0.35
SMAD4-201ENST00000342988 SCARB2Q14108 478 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 ZNF674Q2M3X9 581 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 CERS6Q6ZMG9 384 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 CORO1BQ9BR76 489 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 ANXA4P09525 319 aaPredicted RBP17.26■□□□□ 0.35
SMAD4-201ENST00000342988 NIPAL4Q0D2K0 466 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 SSX2Q16385 188 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 PMEPA1Q969W9 287 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 DUSP16Q9BY84 665 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 HSPB11Q9Y547 144 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 J3QR89 54 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 IGFBP4P22692 258 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 NRIP1P48552 1158 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 ART1P52961 327 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 KCNIP4Q6PIL6 250 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 SLC2A7Q6PXP3 512 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 IGDCC4Q8TDY8 1250 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 GLYATL1Q969I3 302 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 SLC22A18Q96BI1 424 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 HIF1ANQ9NWT6 349 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 CCR8P51685 355 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 GPX6P59796 221 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 RUNX2Q13950 521 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 PARP15Q460N3 678 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 TMEM35AQ53FP2 167 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 ESCO2Q56NI9 601 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 TMPPEQ6ZT21 453 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 POGLUT1Q8NBL1 392 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 HDAC10Q969S8 669 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 CD180Q99467 661 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 MEPEQ9NQ76 525 aaPredicted RBP17.26■□□□□ 0.35
SMAD4-201ENST00000342988 COPZ2Q9P299 210 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 SLC22A17Q8WUG5 538 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 MYO19Q96H55 970 aa17.26■□□□□ 0.35
SMAD4-201ENST00000342988 POLR2J3Q9H1A7 115 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms