RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 DCDP81605 110 aaKnown RBP16.34■□□□□ 0.21
BRCC3-202ENST00000340647 KLRB1Q12918 225 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 CUL1Q13616 776 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 NKAIN1Q4KMZ8 207 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 MLIPQ5VWP3 458 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 CREG2Q8IUH2 290 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 PPIL6Q8IXY8 311 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 OR4N4Q8N0Y3 316 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 FDCSPQ8NFU4 85 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 OR9A1PQ8NGU1 263 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 DLG3Q92796 817 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 SLC22A18Q96BI1 424 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 PWWP2AQ96N64 755 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 PKP4Q99569 1192 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 MIPEPQ99797 713 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 NUDT9Q9BW91 350 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 PCYOX1Q9UHG3 505 aa16.34■□□□□ 0.21
BRCC3-202ENST00000340647 PCDHGA9Q9Y5G4 932 aaKnown RBP16.34■□□□□ 0.21
BRCC3-202ENST00000340647 OR2A25A4D2G3 310 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 TARM1B6A8C7 271 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 GFYI3L273 518 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 DNALI1O14645 258 aaPredicted RBP16.33■□□□□ 0.2
BRCC3-202ENST00000340647 ATXN8OSP0DMR3 200 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 PAMP19021 973 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 AGXTP21549 392 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 CCNFP41002 786 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 SNRPNP63162 240 aaKnown RBP16.33■□□□□ 0.2
BRCC3-202ENST00000340647 DHX9Q08211 1270 aaKnown RBP16.33■□□□□ 0.2
BRCC3-202ENST00000340647 PTK6Q13882 451 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 HSP90AA5PQ58FG0 334 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 SUSD1Q6UWL2 747 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 PPP1R32Q7Z5V6 425 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 MRGPREQ86SM8 312 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 CD200R1Q8TD46 325 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 SKA2Q8WVK7 121 aaPredicted RBP16.33■□□□□ 0.2
BRCC3-202ENST00000340647 ZUFSPQ96AP4 578 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 NAP1L3Q99457 506 aaPredicted RBP16.33■□□□□ 0.2
BRCC3-202ENST00000340647 GPR21Q99679 349 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 MESP1Q9BRJ9 268 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 DHRS4Q9BTZ2 278 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 RAB11FIP5Q9BXF6 653 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 SLC7A5P2Q9GIP4 190 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 SPATA7Q9P0W8 599 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 SAMD15Q9P1V8 674 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.33■□□□□ 0.2
BRCC3-202ENST00000340647 STOX2Q9P2F5 926 aaPredicted RBP16.33■□□□□ 0.2
BRCC3-202ENST00000340647 FBXO5Q9UKT4 447 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 PYCARDQ9ULZ3 195 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 PLAAQ9Y263 795 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 DHRS7Q9Y394 339 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 PTRH2Q9Y3E5 179 aaKnown RBP16.33■□□□□ 0.2
BRCC3-202ENST00000340647 NBPF19A0A087WUL8 3843 aa16.33■□□□□ 0.2
BRCC3-202ENST00000340647 ZSCAN12O43309 604 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 MLLT10P55197 1068 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 SSPNQ14714 243 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 CRYMQ14894 314 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 LONRF1Q17RB8 773 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 NADK2Q4G0N4 442 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 TTLL10Q6ZVT0 673 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 NEK10Q6ZWH5 1172 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 RNF44Q7L0R7 432 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 ARHGEF39Q8N4T4 335 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 PPFIBP2Q8ND30 876 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 OR2Y1Q8NGV0 311 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 ZNF480Q8WV37 535 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 ASB11Q8WXH4 323 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 N4BP2L2Q92802 583 aaPredicted RBP16.32■□□□□ 0.2
BRCC3-202ENST00000340647 KCNJ9Q92806 393 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 MIB2Q96AX9 1013 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 SPSB2Q99619 263 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 AARSD1Q9BTE6 412 aaKnown RBP16.32■□□□□ 0.2
BRCC3-202ENST00000340647 SLC25A23Q9BV35 468 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 ACAT2Q9BWD1 397 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 C20orf96Q9NUD7 363 aaPredicted RBP16.32■□□□□ 0.2
BRCC3-202ENST00000340647 KLHL42Q9P2K6 505 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 SLC17A6Q9P2U8 582 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 SRPK3Q9UPE1 567 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 PRRC2CQ9Y520 2896 aaKnown RBP16.32■□□□□ 0.2
BRCC3-202ENST00000340647 MAD1L1Q9Y6D9 718 aa16.32■□□□□ 0.2
BRCC3-202ENST00000340647 A0A0J9YVX5 310 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 CTAGE9A4FU28 777 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 CLEC18AA5D8T8 446 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 C9J4A7 227 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 E7ENX8 843 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 DSCR3O14972 297 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 FKBP9O95302 570 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 SLC16A8O95907 504 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 ERVK-10P10266 1014 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 OTX2P32243 289 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 PGGT1BP53609 377 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 TAP2Q03519 686 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 THOC5Q13769 683 aaKnown RBP16.31■□□□□ 0.2
BRCC3-202ENST00000340647 ZXDCQ2QGD7 858 aaPredicted RBP16.31■□□□□ 0.2
BRCC3-202ENST00000340647 WASHC2DQ5SRD0 308 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 ZNF425Q6IV72 752 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 CLEC18BQ6UXF7 455 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 Q8NA96 180 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 CLEC18CQ8NCF0 446 aa16.31■□□□□ 0.2
BRCC3-202ENST00000340647 FBXO15Q8NCQ5 510 aaPredicted RBP16.31■□□□□ 0.2
BRCC3-202ENST00000340647 C2CD4AQ8NCU7 369 aaPredicted RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms