RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 NEUROG3Q9Y4Z2 214 aa14.02□□□□□ -0.16
CPSF7-201ENST00000340437 ILVBLA1L0T0 632 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 H3BNC9 293 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 FPGTO14772 594 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 VNN2O95498 520 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 HIST1H2AGP0C0S8 130 aaPredicted RBP14.02□□□□□ -0.17
CPSF7-201ENST00000340437 HIST1H2ADP20671 130 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 RING1Q06587 406 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 DSC1Q08554 894 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 EPS8Q12929 822 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 GPR17Q13304 367 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 NFATC2Q13469 925 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 MADCAM1Q13477 382 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 CLCA4Q14CN2 919 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 KIAA0040Q15053 153 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 POM121L1PQ3SYA9 428 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 SOWAHCQ53LP3 525 aaPredicted RBP14.02□□□□□ -0.17
CPSF7-201ENST00000340437 OR2T5Q6IEZ7 315 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 CADM3Q8N126 398 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 DBF4BQ8NFT6 615 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 OR2T29Q8NH02 315 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 HIST1H2AHQ96KK5 128 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 HIST1H2AJQ99878 128 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 H2AFJQ9BTM1 129 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 TESMINQ9Y4I5 508 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 RGS10O43665 173 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 UGT2B11O75310 529 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 IGLV3-27P01718 113 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 NUDT7P0C024 238 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 COX7A2P14406 83 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 HNF1BP35680 557 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 CLK3P49761 638 aaKnown RBP14.02□□□□□ -0.17
CPSF7-201ENST00000340437 CLCN4P51793 760 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 VLDLRP98155 873 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 CATSPEREQ5SY80 951 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 NCEH1Q6PIU2 408 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 FBXO22Q8NEZ5 403 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 MCFD2Q8NI22 146 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 P2RY12Q9H244 342 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 MARCH7Q9H992 704 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 MAGEE1Q9HCI5 957 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 SH3BP1Q9Y3L3 701 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 PCDHGA10Q9Y5H3 936 aa14.02□□□□□ -0.17
CPSF7-201ENST00000340437 NUMA1Q14980 2115 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 A0A096LPI6 279 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 CLIC1O00299 241 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 GBAP04062 536 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 C21orf33P30042 268 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-201ENST00000340437 SERPINB10P48595 397 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 TOP3AQ13472 1001 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-201ENST00000340437 ADGRF1Q5T601 910 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 LMNTD1Q8N9Z9 388 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 FOXJ1Q92949 421 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 MED8Q96G25 268 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 SLC22A12Q96S37 553 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 REXO4Q9GZR2 422 aaKnown RBP14.01□□□□□ -0.17
CPSF7-201ENST00000340437 PPT2Q9UMR5 302 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 OR6C75A6NL08 312 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 F11P03951 625 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 BPIP17213 487 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 GTF2E2P29084 291 aaKnown RBP14.01□□□□□ -0.17
CPSF7-201ENST00000340437 MAGEA11P43364 429 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 PTCHD3Q3KNS1 767 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 USP39Q53GS9 565 aaKnown RBP14.01□□□□□ -0.17
CPSF7-201ENST00000340437 ZNF648Q5T619 568 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-201ENST00000340437 CPZQ66K79 652 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 CLIP4Q8N3C7 705 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 POC5Q8NA72 575 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 SOCS4Q8WXH5 440 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 FATE1Q969F0 183 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 CLMPQ9H6B4 373 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 RNF167Q9H6Y7 350 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 ZBTB20Q9HC78 741 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-201ENST00000340437 SH3BP4Q9P0V3 963 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 ZNF840PA6NDX5 716 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 MYO1DO94832 1006 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 CD160O95971 181 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 HPRP00739 348 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 UGT2B4P06133 528 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 HMGCLP35914 325 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 OR1E2P47887 323 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 MASP1P48740 699 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 TP53BP2Q13625 1128 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 INAVAQ3KP66 663 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 GPR149Q86SP6 731 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 BEND7Q8N7W2 519 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-201ENST00000340437 MYLIPQ8WY64 445 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 HSH2DQ96JZ2 352 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 RERGLQ9H628 205 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 REEP1Q9H902 201 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 PCDHB1Q9Y5F3 818 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 SNX8Q9Y5X2 465 aa14.01□□□□□ -0.17
CPSF7-201ENST00000340437 SYN3O14994 580 aa14□□□□□ -0.17
CPSF7-201ENST00000340437 CYBAP13498 195 aa14□□□□□ -0.17
CPSF7-201ENST00000340437 KIR3DL1P43629 444 aa14□□□□□ -0.17
CPSF7-201ENST00000340437 CREMQ03060 361 aa14□□□□□ -0.17
CPSF7-201ENST00000340437 CXorf57Q6NSI4 855 aaKnown RBP14□□□□□ -0.17
CPSF7-201ENST00000340437 C17orf99Q6UX52 265 aa14□□□□□ -0.17
CPSF7-201ENST00000340437 ZNF551Q7Z340 670 aaPredicted RBP14□□□□□ -0.17
CPSF7-201ENST00000340437 CACUL1Q86Y37 369 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms