RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 NDC1Q9BTX1 674 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 AKIRIN1Q9H9L7 192 aaPredicted RBP12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 IARS2Q9NSE4 1012 aaKnown RBP12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 TXLNGQ9NUQ3 528 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 IRAK4Q9NWZ3 460 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 ANKMY1Q9P2S6 941 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 TCFL5Q9UL49 500 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 CORO1CQ9ULV4 474 aaPredicted RBP12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 SNX7Q9UNH6 387 aa12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 GCN1Q92616 2671 aaKnown RBP12.82□□□□□ -0.36
SIRPB3P-201ENST00000340424 BAHCC1Q9P281 2608 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 SPTA1P02549 2419 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 ARHGEF33A8MVX0 844 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 MKRN2OSH3BPM6 223 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 ZBTB14O43829 449 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 SRPX2O60687 465 aaPredicted RBP12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 RFPL1O75677 317 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 SEC31AO94979 1220 aaKnown RBP12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 CCNDBP1O95273 360 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 RGS4P49798 205 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 ARL4CP56559 192 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 ILF2Q12905 390 aaKnown RBP12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 GRM7Q14831 915 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 DEFB110Q30KQ9 67 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 BBS9Q3SYG4 887 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 ATP1A1-AS1Q5TC04 95 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 ZNF385CQ66K41 422 aaPredicted RBP12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 ZNF549Q6P9A3 640 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 FIGLAQ6QHK4 219 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 ADGRD1Q6QNK2 874 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 FAM198BQ6UWH4 519 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 TAX1BP1Q86VP1 789 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 MCATQ8IVS2 390 aaKnown RBP12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 OR2L3Q8NG85 312 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 CD200R1Q8TD46 325 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 ASB11Q8WXH4 323 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 FAM136AQ96C01 138 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 CERS2Q96G23 380 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 IP6K3Q96PC2 410 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 GBP5Q96PP8 586 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 UTP6Q9NYH9 597 aaKnown RBP12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 TAS2R13Q9NYV9 303 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 GALPQ9UBC7 116 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 GPN3Q9UHW5 284 aaPredicted RBP12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 TRMT6Q9UJA5 497 aaKnown RBP12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 RUVBL2Q9Y230 463 aaKnown RBP12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 MED16Q9Y2X0 877 aa12.81□□□□□ -0.36
SIRPB3P-201ENST00000340424 GFYI3L273 518 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 TTI1O43156 1089 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 HAUS5O94927 633 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 CAPN1P07384 714 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 FURINP09958 794 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 ERVK-10P10266 1014 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 PIM1P11309 404 aaPredicted RBP12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 CMPK1P30085 196 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 RPA3P35244 121 aaPredicted RBP12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 GRIA3P42263 894 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 ITGA8P53708 1063 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 MPP1Q00013 466 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 CBLBQ13191 982 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 FAM214AQ32MH5 1076 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 PTCHD3Q3KNS1 767 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 CCSMST1Q4G0I0 132 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 MSS51Q4VC12 460 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 LACTB2Q53H82 288 aaPredicted RBP12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 STEAP4Q687X5 459 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 FCRL6Q6DN72 434 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 ATG14Q6ZNE5 492 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 MAATS1Q7Z4T9 603 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 LAPTM4BQ86VI4 370 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 C2orf73Q8N5S3 287 aaPredicted RBP12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 ZNF655Q8N720 491 aaPredicted RBP12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 TTC29Q8NA56 475 aaPredicted RBP12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 OR2A1Q8NGT9 310 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 GIMAP7Q8NHV1 300 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 ADAMTS17Q8TE56 1095 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 ZNF285Q96NJ3 590 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 GPR21Q99679 349 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 SELENOSQ9BQE4 189 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 SPRTNQ9H040 489 aaPredicted RBP12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 ZC3H7BQ9UGR2 993 aaKnown RBP12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 CIDEBQ9UHD4 219 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 TEX264Q9Y6I9 313 aa12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 HELZ2Q9BYK8 2649 aaKnown RBP12.8□□□□□ -0.36
SIRPB3P-201ENST00000340424 A0A1B0GX78 115 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 A0A1W2PPV9 198 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 FITM1A5D6W6 292 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 EFCAB8A8MWE9 144 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 J3QKU1 62 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 SUV39H1O43463 412 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 HCRTR1O43613 425 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 SLC28A2O43868 658 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 ONECUT2O95948 504 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 IGHEP01854 428 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 C8GP07360 202 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 ELK3P41970 407 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 GCGRP47871 477 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 PNLIPRP1P54315 467 aa12.79□□□□□ -0.36
SIRPB3P-201ENST00000340424 RPS18P62269 152 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms