RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 NEUROD4Q9HD90 331 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 AJAP1Q9UKB5 411 aaPredicted RBP7.55□□□□□ -1.2
TRIM2-201ENST00000338700 NUP98P52948 1817 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 ELOA3DA6NLF2 546 aaPredicted RBP7.55□□□□□ -1.2
TRIM2-201ENST00000338700 ANKRD66B4E2M5 251 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 PEX12O00623 359 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 DCLK1O15075 740 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 PRKCHP24723 683 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 GATMP50440 423 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 OC90Q02509 493 aaPredicted RBP7.55□□□□□ -1.2
TRIM2-201ENST00000338700 ELOA3BQ3SY89 546 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 TOR1AIP1Q5JTV8 583 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 ADGRG6Q86SQ4 1221 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 SERINC5Q86VE9 423 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 KBTBD2Q8IY47 623 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 ELOA3Q8NG57 546 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 ESAMQ96AP7 390 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 SMOQ99835 787 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 ABCB10Q9NRK6 738 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 FARSBQ9NSD9 589 aaKnown RBP7.55□□□□□ -1.2
TRIM2-201ENST00000338700 SPEF1Q9Y4P9 236 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 GALTP07902 379 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 INCA1Q0VD86 236 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 SGCBQ16585 318 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 TMEM44Q2T9K0 475 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 PITRM1Q5JRX3 1037 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 LRRC66Q68CR7 880 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 CXorf57Q6NSI4 855 aaKnown RBP7.55□□□□□ -1.2
TRIM2-201ENST00000338700 ZNF783Q6ZMS7 281 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 P4HA3Q7Z4N8 544 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 ZZZ3Q8IYH5 903 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 POC5Q8NA72 575 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 SLC35B2Q8TB61 432 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 CAMK1GQ96NX5 476 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 C12orf65Q9H3J6 166 aaKnown RBP7.55□□□□□ -1.2
TRIM2-201ENST00000338700 FANCFQ9NPI8 374 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 SPATA7Q9P0W8 599 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 MAN2B2Q9Y2E5 1009 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 OAS3Q9Y6K5 1087 aaKnown RBP7.55□□□□□ -1.2
TRIM2-201ENST00000338700 A0A0J9YVX5 310 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 PIRO00625 290 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 ECI2O75521 394 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 PLGP00747 810 aaPredicted RBP7.55□□□□□ -1.2
TRIM2-201ENST00000338700 C9P02748 559 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 ARHGDIBP52566 201 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 BTN3A2P78410 334 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 IRF9Q00978 393 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 SERINC3Q13530 473 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 SCARB2Q14108 478 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 SIM2Q14190 667 aaPredicted RBP7.55□□□□□ -1.2
TRIM2-201ENST00000338700 SLC39A4Q6P5W5 647 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 THOC6Q86W42 341 aaKnown RBP7.55□□□□□ -1.2
TRIM2-201ENST00000338700 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.55□□□□□ -1.2
TRIM2-201ENST00000338700 ZNF366Q8N895 744 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 FAM47BQ8NA70 645 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 PSMA8Q8TAA3 256 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 MED31Q9Y3C7 131 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 TESMINQ9Y4I5 508 aa7.55□□□□□ -1.2
TRIM2-201ENST00000338700 ARHGEF33A8MVX0 844 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 AHCYP23526 432 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 SDC2P34741 201 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 BDKRB1P46663 353 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 BCAP31P51572 246 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 JAG1P78504 1218 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 RBBP4Q09028 425 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 SP140Q13342 867 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 TRMT10BQ6PF06 316 aaKnown RBP7.54□□□□□ -1.2
TRIM2-201ENST00000338700 CENPNQ96H22 339 aaPredicted RBP7.54□□□□□ -1.2
TRIM2-201ENST00000338700 LENG8Q96PV6 779 aaPredicted RBP7.54□□□□□ -1.2
TRIM2-201ENST00000338700 SLC29A3Q9BZD2 475 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 MRM3Q9HC36 420 aaKnown RBP7.54□□□□□ -1.2
TRIM2-201ENST00000338700 ADAP2Q9NPF8 381 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 SDHAF3Q9NRP4 125 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 SMPD3Q9NY59 655 aaPredicted RBP7.54□□□□□ -1.2
TRIM2-201ENST00000338700 P2RX2Q9UBL9 471 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 C19orf25Q9UFG5 118 aaPredicted RBP7.54□□□□□ -1.2
TRIM2-201ENST00000338700 TAC3Q9UHF0 121 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 ZNF222Q9UK12 451 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 RAB26Q9ULW5 256 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 SLC30A4O14863 429 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 ERI3O43414 337 aaKnown RBP7.54□□□□□ -1.2
TRIM2-201ENST00000338700 PRAMEF11O60813 436 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 PRAMEF12O95522 483 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 ZBTB11O95625 1053 aaPredicted RBP7.54□□□□□ -1.2
TRIM2-201ENST00000338700 TGFB1P01137 390 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 PIK3CBP42338 1070 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 UPP1Q16831 310 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 SLC9B1Q4ZJI4 515 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 NUP188Q5SRE5 1749 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 ARHGAP40Q5TG30 622 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 ZDHHC21Q8IVQ6 265 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 GPR65Q8IYL9 337 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 LRRC17Q8N6Y2 441 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 ZNF433Q8N7K0 673 aaPredicted RBP7.54□□□□□ -1.2
TRIM2-201ENST00000338700 MAPK15Q8TD08 544 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 KLHDC7BQ96G42 594 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 CIB1Q99828 191 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 KXD1Q9BQD3 176 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 FAM83CQ9BQN1 747 aa7.54□□□□□ -1.2
TRIM2-201ENST00000338700 RNF121Q9H920 327 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms