RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 GRIA3P42263 894 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 CDC20Q12834 499 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 SF1Q15637 639 aaKnown RBP14.67□□□□□ -0.06
PRKN-201ENST00000338468 CRTC2Q53ET0 693 aaPredicted RBP14.67□□□□□ -0.06
PRKN-201ENST00000338468 ZNF385CQ66K41 422 aaPredicted RBP14.67□□□□□ -0.06
PRKN-201ENST00000338468 FIGLAQ6QHK4 219 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 PAQR3Q6TCH7 311 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 ZDHHC24Q6UX98 284 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 ZBED8Q8IZ13 594 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 OR2L3Q8NG85 312 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 EEF1AKMT1Q8WVE0 214 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 OLFM1Q99784 485 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 MCMBPQ9BTE3 642 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 CHST8Q9H2A9 424 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 ACTR5Q9H9F9 607 aaPredicted RBP14.67□□□□□ -0.06
PRKN-201ENST00000338468 SMYD2Q9NRG4 433 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 FAM114A2Q9NRY5 505 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 TRMT6Q9UJA5 497 aaKnown RBP14.67□□□□□ -0.06
PRKN-201ENST00000338468 ADAMTS6Q9UKP5 1117 aa14.67□□□□□ -0.06
PRKN-201ENST00000338468 BSNQ9UPA5 3926 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 FER1L5A0AVI2 2057 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 C21orf140B9A014 251 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 E7EQ34 232 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 EIF3FO00303 357 aaPredicted RBP14.66□□□□□ -0.06
PRKN-201ENST00000338468 NDC80O14777 642 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 KATNA1O75449 491 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 OR2B3O76000 313 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 FKBP9O95302 570 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 SLC16A8O95907 504 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 FAM87AP0C7U9 286 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 FDXRP22570 491 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 SKIV2L2P42285 1042 aaKnown RBP14.66□□□□□ -0.06
PRKN-201ENST00000338468 GCGRP47871 477 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 RPS18P62269 152 aaKnown RBP14.66□□□□□ -0.06
PRKN-201ENST00000338468 NFKB2Q00653 900 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 MGAT5Q09328 741 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 CALCOCO2Q13137 446 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 ARHGAP19Q14CB8 494 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 COLEC12Q5KU26 742 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 HECTD2Q5U5R9 776 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 SUSD1Q6UWL2 747 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 MCATQ8IVS2 390 aaKnown RBP14.66□□□□□ -0.06
PRKN-201ENST00000338468 LRRC56Q8IYG6 542 aaPredicted RBP14.66□□□□□ -0.06
PRKN-201ENST00000338468 RAB42Q8N4Z0 105 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 GABPB2Q8TAK5 448 aaPredicted RBP14.66□□□□□ -0.06
PRKN-201ENST00000338468 ZNF480Q8WV37 535 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 MR1Q95460 341 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 MIPEPQ99797 713 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 EURLQ9NYK6 297 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 TAS2R13Q9NYV9 303 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.66□□□□□ -0.06
PRKN-201ENST00000338468 PLCL2Q9UPR0 1127 aa14.66□□□□□ -0.06
PRKN-201ENST00000338468 IGKV1-8A0A0C4DH67 115 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 E7ENX8 843 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 SUV39H1O43463 412 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 CTSVO60911 334 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 PIAS1O75925 651 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 URI1O94763 535 aaPredicted RBP14.65□□□□□ -0.06
PRKN-201ENST00000338468 C1QAP02745 245 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 PNLIPRP1P54315 467 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 TAP2Q03519 686 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 PTCHD3Q3KNS1 767 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 UGT3A1Q6NUS8 523 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 C16orf46Q6P387 395 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 FAM198BQ6UWH4 519 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 SYTL1Q8IYJ3 562 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 GPATCH11Q8N954 259 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 PPFIBP2Q8ND30 876 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 FBXO25Q8TCJ0 367 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 CLIP3Q96DZ5 547 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 ZNF285Q96NJ3 590 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 ACTL8Q9H568 366 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 SLC6A20Q9NP91 592 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 SAYSD1Q9NPB0 183 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 ENAMQ9NRM1 1142 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 KCND3Q9UK17 655 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 VWA7Q9Y334 891 aa14.65□□□□□ -0.06
PRKN-201ENST00000338468 UTP11Q9Y3A2 253 aaKnown RBP14.65□□□□□ -0.06
PRKN-201ENST00000338468 SEC16AO15027 2179 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 FLNCQ14315 2725 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 CXorf49A8MYA2 514 aaPredicted RBP14.64□□□□□ -0.07
PRKN-201ENST00000338468 TARM1B6A8C7 271 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 EIF3HO15372 352 aaKnown RBP eCLIP14.64□□□□□ -0.07
PRKN-201ENST00000338468 ZSCAN9O15535 394 aaPredicted RBP14.64□□□□□ -0.07
PRKN-201ENST00000338468 ZBTB14O43829 449 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 CREG1O75629 220 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 PTPN4P29074 926 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 IMPA1P29218 277 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 SSTR1P30872 391 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 PLTPP55058 493 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 GPX6P59796 221 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 SLC7A5Q01650 507 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 MC1RQ01726 317 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 CKAP4Q07065 602 aaKnown RBP14.64□□□□□ -0.07
PRKN-201ENST00000338468 WHAMMP3Q1A5X7 153 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 BORAQ6PGQ7 559 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 TMEM207Q6UWW9 146 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 CAPN12Q6ZSI9 719 aa14.64□□□□□ -0.07
PRKN-201ENST00000338468 UBE2R2Q712K3 238 aaPredicted RBP14.64□□□□□ -0.07
PRKN-201ENST00000338468 STRA8Q7Z7C7 330 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms