RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 DNAH14Q0VDD8 3507 aa14.27□□□□□ -0.12
CDK5RAP3-201ENST00000338399 ZNF839A8K0R7 811 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 MANBAO00462 879 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 BCAT2O15382 392 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CSF2P04141 144 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 GNAZP19086 355 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CCND1P24385 295 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SLC19A1P41440 591 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 DHPSP49366 369 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 BNIP1Q12981 228 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 DOC2AQ14183 400 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SGO1Q5FBB7 561 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 XKR7Q5GH72 579 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PRAMEF14Q5SWL7 426 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PRAMEF13Q5VWM6 474 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 LIPJQ5W064 366 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CHCHD4Q8N4Q1 142 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 OR2T11Q8NH01 316 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SETD7Q8WTS6 366 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SH3KBP1Q96B97 665 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CXorf40BQ96DE9 158 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 LRRC61Q9BV99 259 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ACAT2Q9BWD1 397 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SLC29A3Q9BZD2 475 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PFDN4Q9NQP4 134 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 FARSBQ9NSD9 589 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 GPRC5BQ9NZH0 403 aa14.27□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PRR5-ARHGAP8B1AHC4 643 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 UGDHO60701 494 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ULK1O75385 1050 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 JUPP14923 745 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 NME1P15531 152 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CD22P20273 847 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 VARSP26640 1264 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 RAB28P51157 221 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 NXPH1P58417 271 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ZRSR2Q15696 482 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CATSPEREQ5SY80 951 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 IYDQ6PHW0 289 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 LCTLQ6UWM7 567 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SLCO4C1Q6ZQN7 724 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 TMPRSS11BQ86T26 416 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 TREML1Q86YW5 311 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 LINC01555Q8NAE3 123 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 DTWD2Q8NBA8 298 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 GAB3Q8WWW8 586 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PATE1Q8WXA2 126 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 JPH3Q8WXH2 748 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SMPDL3AQ92484 453 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 KIR3DX1Q9H7L2 352 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ARL8BQ9NVJ2 186 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ZNF490Q9ULM2 529 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ICKQ9UPZ9 632 aa14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ATXN2Q99700 1313 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-201ENST00000338399 A0A1W2PPV9 198 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CAPN14A8MX76 684 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 VILLO15195 856 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 UBDO15205 165 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PEX11AO75192 247 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 VPS4BO75351 444 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CBX6O95503 412 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 KRT6AP02538 564 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 KRT6BP04259 564 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 NDUFS1P28331 727 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PKLRP30613 574 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 KRT6CP48668 564 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 AFF3P51826 1226 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 C21orf59P57076 290 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PCDH1Q08174 1060 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 LACTB2Q53H82 288 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 LYSMD4Q5XG99 296 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 FAM91A1Q658Y4 838 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 Q6ZSR9 355 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SFTPA2Q8IWL1 248 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 OR2L8Q8NGY9 312 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SLC5A11Q8WWX8 675 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 USP7Q93009 1102 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 MAGEB10Q96LZ2 347 aaPredicted RBP14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CCT7Q99832 543 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 RAB11FIP5Q9BXF6 653 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ELOVL6Q9H5J4 265 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 TAC3Q9UHF0 121 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SNX6Q9UNH7 406 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ZDBF2Q9HCK1 2354 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ANKRD65E5RJM6 399 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PDYNP01213 254 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 LBPP18428 481 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PSMB5P28074 263 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 HNF4AP41235 474 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 NEK2P51955 445 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 YBX1P67809 324 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PMS2CLQ68D20 193 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 GRHL2Q6ISB3 625 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CHSY3Q70JA7 882 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 FAM46DQ8NEK8 389 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SELENOMQ8WWX9 145 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 HAUS8Q9BT25 410 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 RIC8BQ9NVN3 520 aa14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 COPG1Q9Y678 874 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-201ENST00000338399 TNRC6BQ9UPQ9 1833 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms