RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 NAA25Q14CX7 972 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 WASHC2DQ5SRD0 308 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 RNF187Q5TA31 235 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-202ENST00000337571 AGAP7PQ5VUJ5 663 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 DRICH1Q6PGQ1 229 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-202ENST00000337571 CNSTQ6PJW8 725 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 IGFL3Q6UXB1 125 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 PPP1R32Q7Z5V6 425 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 GAS2L3Q86XJ1 694 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 CISD2Q8N5K1 135 aaKnown RBP10.22□□□□□ -0.77
CAPN3-202ENST00000337571 LMNTD1Q8N9Z9 388 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 Q8NA96 180 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 LKAAEAR1Q8TD35 194 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 AGAP4Q96P64 663 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 TCF12Q99081 682 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 MENTQ9BUN1 341 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 P2RY12Q9H244 342 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 MRM3Q9HC36 420 aaKnown RBP10.22□□□□□ -0.77
CAPN3-202ENST00000337571 LZTFL1Q9NQ48 299 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 MARCH4Q9P2E8 410 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-202ENST00000337571 NXT1Q9UKK6 140 aaKnown RBP10.22□□□□□ -0.77
CAPN3-202ENST00000337571 COPG1Q9Y678 874 aaKnown RBP10.22□□□□□ -0.77
CAPN3-202ENST00000337571 FAM169AQ9Y6X4 670 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 MAST4O15021 2626 aa10.22□□□□□ -0.77
CAPN3-202ENST00000337571 SNRNP200O75643 2136 aaKnown RBP10.21□□□□□ -0.77
CAPN3-202ENST00000337571 SEC16AO15027 2179 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 PTPN13Q12923 2485 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 E5RI56 91 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 C1orf105O95561 183 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 FGGP02679 453 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 ESR1P03372 595 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 UMODP07911 640 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 CCDC175P0C221 793 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 ERVK-10P10266 1014 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 PAMP19021 973 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 RPS3P23396 243 aaKnown RBP eCLIP10.21□□□□□ -0.77
CAPN3-202ENST00000337571 MGAT1P26572 445 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 CMPK1P30085 196 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 MRPL49Q13405 166 aaKnown RBP10.21□□□□□ -0.77
CAPN3-202ENST00000337571 GRB7Q14451 532 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 NKG7Q16617 165 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 PRR30Q53SZ7 412 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-202ENST00000337571 PRAMEF13Q5VWM6 474 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 FCRL6Q6DN72 434 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 CASC4Q6P4E1 433 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 LRRC8BQ6P9F7 803 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 SNRNP40Q96DI7 357 aaKnown RBP10.21□□□□□ -0.77
CAPN3-202ENST00000337571 C19orf60Q96EN9 201 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 MIPEPQ99797 713 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 KIFC1Q9BW19 673 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 SOX17Q9H6I2 414 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-202ENST00000337571 ZNF552Q9H707 407 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-202ENST00000337571 ZNF304Q9HCX3 659 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 FAM114A2Q9NRY5 505 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 AGPAT4Q9NRZ5 378 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 SEMA3GQ9NS98 782 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 TREX1Q9NSU2 369 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 ASF1BQ9NVP2 202 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 UTP6Q9NYH9 597 aaKnown RBP10.21□□□□□ -0.77
CAPN3-202ENST00000337571 SAMD15Q9P1V8 674 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 PLEKHB1Q9UF11 243 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-202ENST00000337571 ZC3H7BQ9UGR2 993 aaKnown RBP10.21□□□□□ -0.77
CAPN3-202ENST00000337571 FBXL4Q9UKA2 621 aa10.21□□□□□ -0.77
CAPN3-202ENST00000337571 PCM1Q15154 2024 aa10.21□□□□□ -0.78
CAPN3-202ENST00000337571 NBASA2RRP1 2371 aa10.21□□□□□ -0.78
CAPN3-202ENST00000337571 A0A0J9YVX5 310 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 MAGEB16A2A368 324 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 NRDCO43847 1150 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 CEP104O60308 925 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 CNOT3O75175 753 aaKnown RBP10.2□□□□□ -0.78
CAPN3-202ENST00000337571 SEMA7AO75326 666 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 ONECUT2O95948 504 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 MCM3P25205 808 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 RPA3P35244 121 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-202ENST00000337571 HSD17B2P37059 387 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 OR1D4P47884 311 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 KCNJ1P48048 391 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 CARSP49589 748 aaKnown RBP10.2□□□□□ -0.78
CAPN3-202ENST00000337571 TERF1P54274 439 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 TSTA3Q13630 321 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-202ENST00000337571 NR6A1Q15406 480 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 RBBP7Q16576 425 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 TUBB8Q3ZCM7 444 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 ANKRD20A4Q4UJ75 823 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 PRMT9Q6P2P2 845 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 ANKRD12Q6UB98 2062 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 SHISA6Q6ZSJ9 500 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 PARP9Q8IXQ6 854 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 METTL27Q8N6F8 245 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-202ENST00000337571 TRIM58Q8NG06 486 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 OR2L3Q8NG85 312 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 HMGCLL1Q8TB92 370 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 COG1Q8WTW3 980 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 YIPF2Q9BWQ6 316 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 SLC26A1Q9H2B4 701 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 SLC6A20Q9NP91 592 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 SLC22A11Q9NSA0 550 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 SYBUQ9NX95 663 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 CDC14AQ9UNH5 594 aa10.2□□□□□ -0.78
CAPN3-202ENST00000337571 CRYL1Q9Y2S2 319 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms