RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 NELL1Q92832 810 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 REXO5Q96IC2 774 aaKnown RBP17.21■□□□□ 0.35
LRCH3-201ENST00000334859 TOX2Q96NM4 488 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 AMBRA1Q9C0C7 1298 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 FAM83DQ9H4H8 585 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 MAGIXQ9H6Y5 334 aa17.21■□□□□ 0.35
LRCH3-201ENST00000334859 GFYI3L273 518 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 ZNF682O95780 498 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 CTSAP10619 480 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 PRKACGP22612 351 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 PTPN6P29350 595 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 STT3AP46977 705 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 IRF8Q02556 426 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 EPS8Q12929 822 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 KCNAB2Q13303 367 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 SLC14A1Q13336 389 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 ZNF648Q5T619 568 aaPredicted RBP17.21■□□□□ 0.34
LRCH3-201ENST00000334859 Q6ZVL8 140 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 SYT12Q8IV01 421 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 OR2A12Q8NGT7 310 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 NAA50Q9GZZ1 169 aaKnown RBP17.21■□□□□ 0.34
LRCH3-201ENST00000334859 CIDEBQ9UHD4 219 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 PCDHGA8Q9Y5G5 932 aa17.21■□□□□ 0.34
LRCH3-201ENST00000334859 LTBP2Q14767 1821 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 hCG_2014768A0A024R1R8 64 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 WNT9AO14904 365 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 KPNA5O15131 536 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 AMD1P17707 334 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 PRPH2P23942 346 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 DCTP40126 519 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 ETV3P41162 512 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 GZMMP51124 257 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 MAPK10P53779 464 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 ABHD18Q0P651 414 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 SPIDRQ14159 915 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 SYTL3Q4VX76 610 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 R3HCC1LQ7Z5L2 792 aaKnown RBP17.2■□□□□ 0.34
LRCH3-201ENST00000334859 TMEM179BQ7Z7N9 219 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 PLPP6Q8IY26 295 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 TERB1Q8NA31 727 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 CSGALNACT1Q8TDX6 532 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 ASZ1Q8WWH4 475 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 EZH1Q92800 747 aaPredicted RBP17.2■□□□□ 0.34
LRCH3-201ENST00000334859 USE1Q9NZ43 259 aa17.2■□□□□ 0.34
LRCH3-201ENST00000334859 HELZP42694 1942 aaKnown RBP17.2■□□□□ 0.34
LRCH3-201ENST00000334859 CXorf51AA0A1B0GTR3 108 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 A0A1W2PPW3 197 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 SLC16A5O15375 505 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 CPNE6O95741 557 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 ADH1AP07327 375 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 MAP4P27816 1152 aaKnown RBP17.19■□□□□ 0.34
LRCH3-201ENST00000334859 XKR6Q5GH73 641 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 BRAT1Q6PJG6 821 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 FKBP9P1Q75LS8 142 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 PJA1Q8NG27 643 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 OR5K1Q8NHB7 308 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 TCEAL4Q96EI5 215 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 PYURFQ96I23 114 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 PANX1Q96RD7 426 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 MTERF1Q99551 399 aaKnown RBP17.19■□□□□ 0.34
LRCH3-201ENST00000334859 REXO4Q9GZR2 422 aaKnown RBP17.19■□□□□ 0.34
LRCH3-201ENST00000334859 FAF1Q9UNN5 650 aaPredicted RBP17.19■□□□□ 0.34
LRCH3-201ENST00000334859 ANKRD33BA6NCL7 494 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 TMEM202A6NGA9 273 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 EVPLLA8MZ36 301 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 UPK3BL1B0FP48 263 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 UPK3BL2E5RIL1 263 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 CXCL14O95715 111 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 FTH1P02794 183 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 CYP2A6P11509 494 aaPredicted RBP17.19■□□□□ 0.34
LRCH3-201ENST00000334859 TYRP14679 529 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 JUPP14923 745 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 CSF2RAP15509 400 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 ZNF30P17039 623 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 HOXB9P17482 250 aaPredicted RBP17.19■□□□□ 0.34
LRCH3-201ENST00000334859 CRHBPP24387 322 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 VIPR1P32241 457 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 PFN3P60673 137 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 ABRQ12979 859 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 MEP1AQ16819 746 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 POM121L1PQ3SYA9 428 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 RBM48Q5RL73 367 aaKnown RBP17.19■□□□□ 0.34
LRCH3-201ENST00000334859 OR7A2PQ8NGA2 310 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 SGCDQ92629 289 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 MED8Q96G25 268 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 C3orf18Q9UK00 162 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 CDH7Q9ULB5 785 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 ORC6Q9Y5N6 252 aa17.19■□□□□ 0.34
LRCH3-201ENST00000334859 NUP214P35658 2090 aaPredicted RBP17.18■□□□□ 0.34
LRCH3-201ENST00000334859 A0A1W2PQ67 120 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 LEFTY1O75610 366 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 PRPS1L1P21108 318 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 GALK1P51570 392 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 EMP3P54852 163 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 MYBPC3Q14896 1274 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 FGD3Q5JSP0 725 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 ZCCHC8Q6NZY4 707 aaKnown RBP17.18■□□□□ 0.34
LRCH3-201ENST00000334859 LILRA6Q6PI73 481 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 DHRS4L2Q6PKH6 230 aa17.18■□□□□ 0.34
LRCH3-201ENST00000334859 CYB5D2Q8WUJ1 264 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms