RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 HTR6P50406 440 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 SFTPA2Q8IWL1 248 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 KIRREL3Q8IZU9 778 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 METTL6Q8TCB7 284 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 C19orf60Q96EN9 201 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 MMADHCQ9H3L0 296 aaPredicted RBP22.53■■□□□ 1.2
TSEN54-201ENST00000333213 SH2B3Q9UQQ2 575 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 FRYLO94915 3013 aa22.53■■□□□ 1.2
TSEN54-201ENST00000333213 THADAQ6YHU6 1953 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 E9PBE3 544 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 FCHO1O14526 889 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 KLHL41O60662 606 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 GPR37L1O60883 481 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 CBX6O95503 412 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 NPPBP16860 134 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 ILF3Q12906 894 aaKnown RBP eCLIP22.52■■□□□ 1.2
TSEN54-201ENST00000333213 CDC16Q13042 620 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 C1orf61Q13536 156 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 BLMHQ13867 455 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 SCIMPQ6UWF3 145 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 DCP2Q8IU60 420 aaKnown RBP22.52■■□□□ 1.2
TSEN54-201ENST00000333213 AFAP1L2Q8N4X5 818 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 LINC01555Q8NAE3 123 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 PTCD3Q96EY7 689 aaKnown RBP22.52■■□□□ 1.2
TSEN54-201ENST00000333213 NAF1Q96HR8 494 aaKnown RBP22.52■■□□□ 1.2
TSEN54-201ENST00000333213 CAMK1GQ96NX5 476 aa22.52■■□□□ 1.2
TSEN54-201ENST00000333213 TRBV23OR9-2A0A075B6M9 112 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 E7EQ34 232 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 CRCPO75575 148 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 LINC00032P0C843 101 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 CD22P20273 847 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 CSNK1EP49674 416 aaKnown RBP22.51■■□□□ 1.19
TSEN54-201ENST00000333213 TAF11Q15544 211 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 TMEM198Q66K66 360 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 STON2Q8WXE9 905 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 BTBD10Q9BSF8 475 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 LRRC61Q9BV99 259 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 ARMCX1Q9P291 453 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 CLDN9O95484 217 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 CSF2P04141 144 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 F3P13726 295 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 HGFP14210 728 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 JUNDP17535 347 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 SLC19A1P41440 591 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 YBX1P67809 324 aaKnown RBP22.51■■□□□ 1.19
TSEN54-201ENST00000333213 CYP2A13Q16696 494 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 PRAMEF14Q5SWL7 426 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 PATE1Q8WXA2 126 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 NEIL2Q969S2 332 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 NSL1Q96IY1 281 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 HBEGFQ99075 208 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 NUSAP1Q9BXS6 441 aaKnown RBP22.51■■□□□ 1.19
TSEN54-201ENST00000333213 ACTR8Q9H981 624 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 TAAR2Q9P1P5 351 aa22.51■■□□□ 1.19
TSEN54-201ENST00000333213 NKX1-2Q9UD57 310 aaPredicted RBP22.51■■□□□ 1.19
TSEN54-201ENST00000333213 APOBEC3BQ9UH17 382 aaKnown RBP22.51■■□□□ 1.19
TSEN54-201ENST00000333213 ARHGEF17Q96PE2 2063 aaPredicted RBP22.51■■□□□ 1.19
TSEN54-201ENST00000333213 SPAG17Q6Q759 2223 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 TDRD6O60522 2096 aaKnown RBP22.5■■□□□ 1.19
TSEN54-201ENST00000333213 KCNE1BA0A087WTH5 132 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 FFAR3O14843 346 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 GPR42O15529 346 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 SERPINA6P08185 405 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 HALP42357 657 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 NXPH1P58417 271 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 PRRT3Q5FWE3 981 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 CAPN13Q6MZZ7 669 aaPredicted RBP22.5■■□□□ 1.19
TSEN54-201ENST00000333213 LARP4Q71RC2 724 aaKnown RBP eCLIP22.5■■□□□ 1.195e-6■■□□□ 12.4
TSEN54-201ENST00000333213 LPCAT2Q7L5N7 544 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 DDIASQ8IXT1 998 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 OR52E1Q8NGJ3 308 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 XKR8Q9H6D3 395 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 MVB12BQ9H7P6 319 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 FARSBQ9NSD9 589 aaKnown RBP22.5■■□□□ 1.19
TSEN54-201ENST00000333213 GIMAP2Q9UG22 337 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 TRPS1Q9UHF7 1281 aa22.5■■□□□ 1.19
TSEN54-201ENST00000333213 BCAT2O15382 392 aaPredicted RBP22.49■■□□□ 1.19
TSEN54-201ENST00000333213 ENO1P06733 434 aaKnown RBP22.49■■□□□ 1.19
TSEN54-201ENST00000333213 NME1P15531 152 aaKnown RBP22.49■■□□□ 1.19
TSEN54-201ENST00000333213 CHIT1Q13231 466 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 TSTA3Q13630 321 aaPredicted RBP22.49■■□□□ 1.19
TSEN54-201ENST00000333213 UBAP2LQ14157 1087 aaKnown RBP22.49■■□□□ 1.19
TSEN54-201ENST00000333213 ARHGAP19Q14CB8 494 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 ABRAXAS2Q15018 415 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 CPSF6Q16630 551 aaKnown RBP eCLIP22.49■■□□□ 1.19
TSEN54-201ENST00000333213 MYLK4Q86YV6 388 aaPredicted RBP22.49■■□□□ 1.19
TSEN54-201ENST00000333213 APLFQ8IW19 511 aaPredicted RBP22.49■■□□□ 1.19
TSEN54-201ENST00000333213 L3MBTL4Q8NA19 623 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 DTWD2Q8NBA8 298 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 OR2T11Q8NH01 316 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 CCDC28BQ9BUN5 200 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 GSDMCQ9BYG8 508 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 DENND2DQ9H6A0 471 aaPredicted RBP22.49■■□□□ 1.19
TSEN54-201ENST00000333213 TMEM74BQ9NUR3 256 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 A0A1W2PPV9 198 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 HRO43593 1189 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 CTSEP14091 401 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 BLKP51451 505 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 PCDH1Q08174 1060 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 XKR7Q5GH72 579 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms