RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 BADQ92934 168 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 WDR6Q9NNW5 1121 aaKnown RBP12.69□□□□□ -0.38
VSTM4-202ENST00000332853 SPHK2Q9NRA0 654 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 MATN4O95460 622 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 ZNF30P17039 623 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 STXBP1P61764 594 aaKnown RBP12.69□□□□□ -0.38
VSTM4-202ENST00000332853 UBXN2BQ14CS0 331 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 IFI44LQ53G44 452 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 PM20D1Q6GTS8 502 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 IZUMO1Q8IYV9 350 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 SMYD1Q8NB12 490 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 SRFBP1Q8NEF9 429 aaKnown RBP12.69□□□□□ -0.38
VSTM4-202ENST00000332853 KCNJ9Q92806 393 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 NDUFS4O43181 175 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 CDH1P12830 882 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 CPN2P22792 545 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 AKT2P31751 481 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 UNC50Q53HI1 259 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 SFT2D3Q587I9 215 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 ZNF789Q5FWF6 425 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 AGTRAPQ6RW13 159 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 SYVN1Q86TM6 617 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 SVOPLQ8N434 492 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 PCBD2Q9H0N5 130 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 C8orf4Q9NR00 106 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 SSR3Q9UNL2 185 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 TGM5O43548 720 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 CHRM1P11229 460 aaPredicted RBP12.69□□□□□ -0.38
VSTM4-202ENST00000332853 DGKEP52429 567 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 MERTKQ12866 999 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 TMEM115Q12893 351 aaPredicted RBP12.69□□□□□ -0.38
VSTM4-202ENST00000332853 LARS2Q15031 903 aaKnown RBP12.69□□□□□ -0.38
VSTM4-202ENST00000332853 CCDC92Q53HC0 331 aaPredicted RBP12.69□□□□□ -0.38
VSTM4-202ENST00000332853 CROCCP3Q8IVE0 287 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 DEFB119Q8N690 84 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 KBTBD8Q8NFY9 601 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 SGIP1Q9BQI5 828 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 DNAJB9Q9UBS3 223 aa12.69□□□□□ -0.38
VSTM4-202ENST00000332853 ACRV1P26436 265 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 EEFSECP57772 596 aaKnown RBP12.68□□□□□ -0.38
VSTM4-202ENST00000332853 LEMD2Q8NC56 503 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 SLCO3A1Q9UIG8 710 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 DHRS7Q9Y394 339 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 SDHDO14521 159 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 CD247P20963 164 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 SLC26A3P40879 764 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 PGDP52209 483 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 CDH15P55291 814 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 ROR2Q01974 943 aaKnown RBP12.68□□□□□ -0.38
VSTM4-202ENST00000332853 RFTN2Q52LD8 501 aaPredicted RBP12.68□□□□□ -0.38
VSTM4-202ENST00000332853 FAM220AQ7Z4H9 259 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 GPR135Q8IZ08 494 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 POP5Q969H6 163 aaKnown RBP12.68□□□□□ -0.38
VSTM4-202ENST00000332853 TMBIM1Q969X1 311 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 RTP4Q96DX8 246 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 ZNF514Q96K75 400 aaPredicted RBP12.68□□□□□ -0.38
VSTM4-202ENST00000332853 KCNC2Q96PR1 638 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 PLGRKTQ9HBL7 147 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 MAGEE1Q9HCI5 957 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 PDE10AQ9Y233 779 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 CENPXA8MT69 81 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 ADAMDEC1O15204 470 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 RB1P06400 928 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 CHRM5P08912 532 aaPredicted RBP12.68□□□□□ -0.38
VSTM4-202ENST00000332853 TCEA1P23193 301 aaKnown RBP12.68□□□□□ -0.38
VSTM4-202ENST00000332853 DNAJB1P25685 340 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 ATP12AP54707 1039 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 FBXO15Q8NCQ5 510 aaPredicted RBP12.68□□□□□ -0.38
VSTM4-202ENST00000332853 A0A1W2PP18 115 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 GJB3O75712 270 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 PGRP06401 933 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 CD70P32970 193 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 VEGFBP49765 207 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 PRR5P85299 388 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.68□□□□□ -0.38
VSTM4-202ENST00000332853 OGFOD2Q6N063 350 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 C1GALT1C1Q96EU7 318 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 CNPPD1Q9BV87 410 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 ZCWPW2A0A1B0GU75 182 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 STX16O14662 325 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 NME6O75414 186 aaPredicted RBP12.68□□□□□ -0.38
VSTM4-202ENST00000332853 MFN2O95140 757 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 LAMP2P13473 410 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 AVPR1BP47901 424 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 SLC13A2Q13183 592 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 CST9Q5W186 159 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 KRTCAP2Q8N6L1 136 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 OR5K1Q8NHB7 308 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 TFGQ92734 400 aaPredicted RBP12.68□□□□□ -0.38
VSTM4-202ENST00000332853 PRICKLE1Q96MT3 831 aaPredicted RBP12.68□□□□□ -0.38
VSTM4-202ENST00000332853 SLC38A3Q99624 504 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 DNAAF2Q9NVR5 837 aaKnown RBP12.68□□□□□ -0.38
VSTM4-202ENST00000332853 MTRRQ9UBK8 725 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 CLEC4AQ9UMR7 237 aa12.68□□□□□ -0.38
VSTM4-202ENST00000332853 GNB5O14775 395 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 AP1S2P56377 157 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 LAPTM4AQ15012 233 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 TEAD4Q15561 434 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 TSPAN33Q86UF1 283 aa12.67□□□□□ -0.38
VSTM4-202ENST00000332853 ZBED6CLQ96FA7 236 aaPredicted RBP12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms