RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 IZUMO3Q5VZ72 239 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 KIAA0930Q6ICG6 404 aaPredicted RBP6.13□□□□□ -1.43
SMG1-201ENST00000330588 MRNIPQ6NTE8 343 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 BORAQ6PGQ7 559 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 ZNF534Q76KX8 674 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 HDXQ7Z353 690 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 TIPARPQ7Z3E1 657 aaKnown RBP6.13□□□□□ -1.43
SMG1-201ENST00000330588 AMIGO1Q86WK6 493 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 ADGRF3Q8IZF5 1079 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 PRELID2Q8N945 189 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 LRRN4CLQ8ND94 238 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 OR52E1Q8NGJ3 308 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 HMGCLL1Q8TB92 370 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 FAM168AQ92567 244 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 SLC22A18Q96BI1 424 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 ZNF501Q96CX3 271 aaPredicted RBP6.13□□□□□ -1.43
SMG1-201ENST00000330588 STAMBPL1Q96FJ0 436 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 MAP3K3Q99759 626 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 P2RY12Q9H244 342 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 XAB2Q9HCS7 855 aaKnown RBP6.13□□□□□ -1.43
SMG1-201ENST00000330588 APMAPQ9HDC9 416 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 FGF21Q9NSA1 209 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 KCND1Q9NSA2 647 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 CATSPERZQ9NTU4 200 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 SMARCAL1Q9NZC9 954 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 PADI1Q9ULC6 663 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 NEU2Q9Y3R4 380 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 KLK4Q9Y5K2 254 aa6.13□□□□□ -1.43
SMG1-201ENST00000330588 LOC101059948A0A1B0GTJ6 334 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 FAM237BA0A1B0GVD1 139 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 DBX1A6NMT0 343 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 B8ZZF3 427 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 PGRMC1O00264 195 aaKnown RBP6.12□□□□□ -1.43
SMG1-201ENST00000330588 CEP104O60308 925 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 KIAA0754O94854 1291 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 ESR1P03372 595 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 APOA4P06727 396 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 POLBP06746 335 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 FOLR1P15328 257 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 WT1P19544 449 aaPredicted RBP6.12□□□□□ -1.43
SMG1-201ENST00000330588 PRDX3P30048 256 aaKnown RBP6.12□□□□□ -1.43
SMG1-201ENST00000330588 CD96P40200 585 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 CCNFP41002 786 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 MAGEA3P43357 314 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 BASP1P80723 227 aaKnown RBP6.12□□□□□ -1.43
SMG1-201ENST00000330588 FOXM1Q08050 763 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 SNX1Q13596 522 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 GBX1Q14549 363 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 PLEKHS1Q5SXH7 462 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 SPESP1Q6UW49 350 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 GK5Q6ZS86 529 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 FAM92BQ6ZTR7 304 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 FAM214BQ7L5A3 538 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 GSTA5Q7RTV2 222 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 VASH2Q86V25 355 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 RASGRP3Q8IV61 690 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 DCUN1D3Q8IWE4 304 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 REXO1L1PQ8IX06 675 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 LILRA3Q8N6C8 439 aaPredicted RBP6.12□□□□□ -1.43
SMG1-201ENST00000330588 CLDN19Q8N6F1 224 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 GLIS1Q8NBF1 620 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 DENND1AQ8TEH3 1009 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 STARD8Q92502 1023 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 CPT1BQ92523 772 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 ELMO1Q92556 727 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 TCTN2Q96GX1 697 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 SEC16BQ96JE7 1060 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 RUNDC3BQ96NL0 473 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 FERD3LQ96RJ6 166 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 C17orf62Q9BQA9 187 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 DHRS4Q9BTZ2 278 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 AP1M1Q9BXS5 423 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 FAM96AQ9H5X1 160 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 GRPEL1Q9HAV7 217 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 LHX9Q9NQ69 397 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 INTS10Q9NVR2 710 aaKnown RBP6.12□□□□□ -1.43
SMG1-201ENST00000330588 KLHL3Q9UH77 587 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 GNPTGQ9UJJ9 305 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 CDYLQ9Y232 598 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 PCDHB14Q9Y5E9 798 aa6.12□□□□□ -1.43
SMG1-201ENST00000330588 PIKFYVEQ9Y2I7 2098 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 A0A0J9YY10 115 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 GOLGA6L10A0A0M3HER8 536 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 PIPSLA2A3N6 862 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 OR51F1A6NGY5 319 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 EIF3FO00303 357 aaPredicted RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 BTN3A3O00478 584 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 BTN3A1O00481 513 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 CCL22O00626 93 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 CD3EAPO15446 510 aaKnown RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 KIF1CO43896 1103 aaKnown RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 PHF2O75151 1096 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 HTR3BO95264 441 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 KLK3P07288 261 aaPredicted RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 ETS1P14921 441 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 TCP1P17987 556 aaKnown RBP6.11□□□□□ -1.43
SMG1-201ENST00000330588 ITGB6P18564 788 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 TCN2P20062 427 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 CDH3P22223 829 aa6.11□□□□□ -1.43
SMG1-201ENST00000330588 PDHA2P29803 388 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms