RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 RNGTTO60942 597 aaKnown RBP16.42■□□□□ 0.22
DDX41-201ENST00000330503 DNTTP04053 509 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 HOXB2P14652 356 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 AMD1P17707 334 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 TACR1P25103 407 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 HNF4AP41235 474 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 TBPL1P62380 186 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 TAP2Q03519 686 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 SGCGQ13326 291 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 LPCAT4Q643R3 524 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 CAPN13Q6MZZ7 669 aaPredicted RBP16.42■□□□□ 0.22
DDX41-201ENST00000330503 SYTL1Q8IYJ3 562 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 PQLC1Q8N2U9 271 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 CLHC1Q8NHS4 586 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 TMEM74Q96NL1 305 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 ZBTB18Q99592 522 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 WDR26Q9H7D7 661 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 SPATA6Q9NWH7 488 aaPredicted RBP16.42■□□□□ 0.22
DDX41-201ENST00000330503 GPRC5BQ9NZH0 403 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 MCM8Q9UJA3 840 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 NUMA1Q14980 2115 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 PRSS51A0A1B0GVH4 220 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 TCRBV3S1A0A5B6 114 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 CASQ2O14958 399 aaPredicted RBP16.42■□□□□ 0.22
DDX41-201ENST00000330503 POU3F3P20264 500 aaPredicted RBP16.42■□□□□ 0.22
DDX41-201ENST00000330503 ADPRHP54922 357 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 CLDN8P56748 225 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 ZNF33BQ06732 778 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 SPATS1Q496A3 300 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 CMPK2Q5EBM0 449 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 CYP2R1Q6VVX0 501 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 HID1Q8IV36 788 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 LILRA2Q8N149 483 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 SLC44A3Q8N4M1 653 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 GLB1L3Q8NCI6 653 aaPredicted RBP16.42■□□□□ 0.22
DDX41-201ENST00000330503 OR5AR1Q8NGP9 310 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 FCRL1Q96LA6 429 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 FBRSQ9HAH7 460 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 LIMD1Q9UGP4 676 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 NEUROG3Q9Y4Z2 214 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 KCNE2Q9Y6J6 123 aa16.42■□□□□ 0.22
DDX41-201ENST00000330503 KMOO15229 486 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 PRPS2P11908 318 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 ATP6V1C1P21283 382 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 PNLIPRP1P54315 467 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 PHC1P78364 1004 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 RHDQ02161 417 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 CSTF3Q12996 717 aaKnown RBP16.41■□□□□ 0.22
DDX41-201ENST00000330503 PWP1Q13610 501 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 MAP7D1Q3KQU3 841 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 FAM174BQ3ZCQ3 159 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 SPANXN4Q5MJ08 99 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 CATSPEREQ5SY80 951 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 ADNP2Q6IQ32 1131 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 KIAA1161Q6NSJ0 714 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 DHFR2Q86XF0 187 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 TFGQ92734 400 aaPredicted RBP16.41■□□□□ 0.22
DDX41-201ENST00000330503 ZUFSPQ96AP4 578 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 SLCO4A1Q96BD0 722 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 IL17FQ96PD4 163 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 MTERF1Q99551 399 aaKnown RBP16.41■□□□□ 0.22
DDX41-201ENST00000330503 PRO3102Q9H379 93 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 KCNK12Q9HB15 430 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 SGK2Q9HBY8 427 aa16.41■□□□□ 0.22
DDX41-201ENST00000330503 SDC1P18827 310 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 ATP6V1B2P21281 511 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 DRD1P21728 446 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 GSK3BP49841 420 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 LIPEQ05469 1076 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 HORMAD1Q86X24 394 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 GTF2H4Q92759 462 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 WDR34Q96EX3 536 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 DUS3LQ96G46 650 aaKnown RBP16.4■□□□□ 0.22
DDX41-201ENST00000330503 RSRC1Q96IZ7 334 aaKnown RBP16.4■□□□□ 0.22
DDX41-201ENST00000330503 APOLD1Q96LR9 279 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 NRTNQ99748 197 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 C8orf33Q9H7E9 229 aaPredicted RBP16.4■□□□□ 0.22
DDX41-201ENST00000330503 ITM2CQ9NQX7 267 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 PHPT1Q9NRX4 125 aaPredicted RBP16.4■□□□□ 0.22
DDX41-201ENST00000330503 C6orf203Q9P0P8 240 aaPredicted RBP16.4■□□□□ 0.22
DDX41-201ENST00000330503 PLAGL1Q9UM63 463 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 ASF1AQ9Y294 204 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 TMED5Q9Y3A6 229 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 SHISA7A6NL88 538 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 IL6P05231 212 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 ACADSP16219 412 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 IGFBP4P22692 258 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 IGFALSP35858 605 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 PLIN5Q00G26 463 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 GRSF1Q12849 480 aaKnown RBP eCLIP16.4■□□□□ 0.22
DDX41-201ENST00000330503 NOXRED1Q6NXP6 359 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 OR7G3Q8NG95 312 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 SLC13A3Q8WWT9 602 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 EGLN2Q96KS0 407 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 PPM1MQ96MI6 270 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 UHRF1Q96T88 793 aaPredicted RBP16.4■□□□□ 0.22
DDX41-201ENST00000330503 CGREF1Q99674 301 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 VPS29Q9UBQ0 182 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 EGFL7Q9UHF1 273 aa16.4■□□□□ 0.22
DDX41-201ENST00000330503 RIMS3Q9UJD0 308 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms