RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 DPYSL2Q16555 572 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 HSD17B12Q53GQ0 312 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 CES3Q6UWW8 571 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 KBTBD8Q8NFY9 601 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 ZNF431Q8TF32 576 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-201ENST00000328923 HTR3CQ8WXA8 447 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 PGLYRP2Q96PD5 576 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 ZBTB18Q99592 522 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 PRDM9Q9NQV7 894 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 ZNF275Q9NSD4 429 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-201ENST00000328923 ABCB8Q9NUT2 735 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 KCMF1Q9P0J7 381 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 MBD2Q9UBB5 411 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 MGAT4BQ9UQ53 548 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 TPRKBQ9Y3C4 175 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 PCDHB5Q9Y5E4 795 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 DNMT3AQ9Y6K1 912 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-201ENST00000328923 LCTP09848 1927 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 TRAV19A0A0A6YYK7 116 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 hCG_1807616A0A1W2PRN6 198 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 MROH6A6NGR9 719 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 M0QYV0 167 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 M0R082 166 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 PPP6CO00743 305 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 BCKDKO14874 412 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 CBX7O95931 251 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 HPRP00739 348 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 GNRH1P01148 92 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 TNNC2P02585 160 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 EDN1P05305 212 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 PRKACGP22612 351 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 CPN2P22792 545 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 YWHAQP27348 245 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 HOXC13P31276 330 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 SESN2P58004 480 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-201ENST00000328923 PUDPQ08623 228 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 ASAH1Q13510 395 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 KDM4DQ6B0I6 523 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 ZNF470Q6ECI4 717 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 SUSD1Q6UWL2 747 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 STRA8Q7Z7C7 330 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 STPG2Q8N412 459 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 GPR151Q8TDV0 419 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 RNF34Q969K3 372 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 HOPXQ9BPY8 73 aaPredicted RBP11.56□□□□□ -0.56
SHMT2-201ENST00000328923 COPS4Q9BT78 406 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 REG4Q9BYZ8 158 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 FBRSL1Q9HCM7 1045 aaKnown RBP11.56□□□□□ -0.56
SHMT2-201ENST00000328923 SDHAF2Q9NX18 166 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 UBQLN2Q9UHD9 624 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 MGAT4AQ9UM21 535 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 ZFR2Q9UPR6 939 aaKnown RBP11.56□□□□□ -0.56
SHMT2-201ENST00000328923 ERVK-19Q9WJR5 959 aa11.56□□□□□ -0.56
SHMT2-201ENST00000328923 ANK1P16157 1881 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 ADM5C9JUS6 153 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 DNASE2O00115 360 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 LGALS8O00214 317 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 NPHS1O60500 1241 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 EIF1BO60739 113 aaKnown RBP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 HOXC6P09630 235 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 UMPSP11172 480 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 TNFSF9P41273 254 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 EIF1P41567 113 aaKnown RBP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 ABATP80404 500 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 IL18R1Q13478 541 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 LARS2Q15031 903 aaKnown RBP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 ANGPT1Q15389 498 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 UGT3A2Q3SY77 523 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 RAB6CQ53S08 254 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 CNSTQ6PJW8 725 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 ABHD15Q6UXT9 468 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 CYP4Z2PQ8N1L4 340 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 TMEM151AQ8N4L1 468 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 ACVR1CQ8NER5 493 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 OR6C4Q8NGE1 309 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 GANCQ8TET4 914 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 AP2M1Q96CW1 435 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 RDH12Q96NR8 316 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 RBP7Q96R05 134 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 GFM1Q96RP9 751 aaKnown RBP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 CHCHD6Q9BRQ6 235 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 RAB6CQ9H0N0 254 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 ALG2Q9H553 416 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 ZNF768Q9H5H4 540 aaKnown RBP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 TASP1Q9H6P5 420 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 JPH1Q9HDC5 661 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 TNFRSF12AQ9NP84 129 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 GPATCH2LQ9NWQ4 482 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 GLS2Q9UI32 602 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 SLC6A14Q9UN76 642 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 STMND1H3BQB6 276 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 SCAMP3O14828 347 aaKnown RBP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 MYL12BO14950 172 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 CILPO75339 1184 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 TRIM3O75382 744 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 PRSS23O95084 383 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 MPC2O95563 127 aa11.55□□□□□ -0.56
SHMT2-201ENST00000328923 CFDP00746 253 aaPredicted RBP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 HNRNPLP14866 589 aaKnown RBP eCLIP11.55□□□□□ -0.56
SHMT2-201ENST00000328923 JUNDP17535 347 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms