RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 DNAJB14Q8TBM8 379 aa23.98■■□□□ 1.43
PPP4R4-202ENST00000328839 PPP4R1Q8TF05 950 aa23.98■■□□□ 1.43
PPP4R4-202ENST00000328839 PEX13Q92968 403 aa23.98■■□□□ 1.43
PPP4R4-202ENST00000328839 RAD51AP1Q96B01 352 aa23.98■■□□□ 1.43
PPP4R4-202ENST00000328839 MIPEPQ99797 713 aa23.98■■□□□ 1.43
PPP4R4-202ENST00000328839 RBSNQ9H1K0 784 aa23.98■■□□□ 1.43
PPP4R4-202ENST00000328839 SLC26A1Q9H2B4 701 aa23.98■■□□□ 1.43
PPP4R4-202ENST00000328839 PAK5Q9P286 719 aa23.98■■□□□ 1.43
PPP4R4-202ENST00000328839 TSR3Q9UJK0 312 aaKnown RBP23.98■■□□□ 1.43
PPP4R4-202ENST00000328839 NXT1Q9UKK6 140 aaKnown RBP23.98■■□□□ 1.43
PPP4R4-202ENST00000328839 RUVBL2Q9Y230 463 aaKnown RBP23.98■■□□□ 1.43
PPP4R4-202ENST00000328839 NFS1Q9Y697 457 aa23.98■■□□□ 1.43
PPP4R4-202ENST00000328839 FAM169AQ9Y6X4 670 aa23.98■■□□□ 1.43
PPP4R4-202ENST00000328839 KRT87PA6NCN2 255 aa23.97■■□□□ 1.43
PPP4R4-202ENST00000328839 WIPF3A6NGB9 483 aa23.97■■□□□ 1.43
PPP4R4-202ENST00000328839 CRADDP78560 199 aa23.97■■□□□ 1.43
PPP4R4-202ENST00000328839 FAM214AQ32MH5 1076 aa23.97■■□□□ 1.43
PPP4R4-202ENST00000328839 PCID2Q5JVF3 399 aa23.97■■□□□ 1.43
PPP4R4-202ENST00000328839 KIRREL2Q6UWL6 708 aa23.97■■□□□ 1.43
PPP4R4-202ENST00000328839 OTOAQ7RTW8 1153 aa23.97■■□□□ 1.43
PPP4R4-202ENST00000328839 SLC13A5Q86YT5 568 aaPredicted RBP23.97■■□□□ 1.43
PPP4R4-202ENST00000328839 ZUFSPQ96AP4 578 aa23.97■■□□□ 1.43
PPP4R4-202ENST00000328839 VPS50Q96JG6 964 aa23.97■■□□□ 1.43
PPP4R4-202ENST00000328839 CTSVO60911 334 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 NDUFS3O75489 264 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 ONECUT2O95948 504 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 ZSCAN5DPP0CG00 497 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 EIF3BP55884 814 aaKnown RBP23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 CCSMST1Q4G0I0 132 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 WASHC2DQ5SRD0 308 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 CNSTQ6PJW8 725 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 PRSS58Q8IYP2 241 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 THOC3Q96J01 351 aaKnown RBP23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 FOPNLQ96NB1 174 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 CRB3Q9BUF7 120 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 LHPPQ9H008 270 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 EPS8L2Q9H6S3 715 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 SEMA3GQ9NS98 782 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 IL1RAPL1Q9NZN1 696 aa23.96■■□□□ 1.43
PPP4R4-202ENST00000328839 DOPEY1Q5JWR5 2465 aa23.95■■□□□ 1.43
PPP4R4-202ENST00000328839 A0A0J9YVX5 310 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 HYKKA2RU49 373 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 TARM1B6A8C7 271 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 KPNA5O15131 536 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 FKBP9O95302 570 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 C1orf105O95561 183 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 EIF2S1P05198 315 aaKnown RBP23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 DCTP40126 519 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 CDC16Q13042 620 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 FRMPD2BQ6IN97 320 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 ST6GALNAC3Q8NDV1 305 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 ZNF285Q96NJ3 590 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 BARD1Q99728 777 aaKnown RBP23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 P2RY12Q9H244 342 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 ZNF304Q9HCX3 659 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 ZC3H7BQ9UGR2 993 aaKnown RBP23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 MRFAP1Q9Y605 127 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 CNTRLQ7Z7A1 2325 aa23.95■■□□□ 1.42
PPP4R4-202ENST00000328839 FITM1A5D6W6 292 aa23.94■■□□□ 1.42
PPP4R4-202ENST00000328839 PRICKLE3O43900 615 aaPredicted RBP23.94■■□□□ 1.42
PPP4R4-202ENST00000328839 NRP2O60462 931 aa23.94■■□□□ 1.42
PPP4R4-202ENST00000328839 SRPX2O60687 465 aaPredicted RBP23.94■■□□□ 1.42
PPP4R4-202ENST00000328839 BASP1P80723 227 aaKnown RBP23.94■■□□□ 1.42
PPP4R4-202ENST00000328839 OCA2Q04671 838 aa23.94■■□□□ 1.42
PPP4R4-202ENST00000328839 ZNF169Q14929 603 aaPredicted RBP23.94■■□□□ 1.42
PPP4R4-202ENST00000328839 OR2L3Q8NG85 312 aa23.94■■□□□ 1.42
PPP4R4-202ENST00000328839 OR11G2Q8NGC1 345 aa23.94■■□□□ 1.42
PPP4R4-202ENST00000328839 ERVK-10P10266 1014 aa23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 NMBRP28336 390 aa23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 RPL22P35268 128 aaKnown RBP23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 KLC1Q07866 573 aa23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 IGFL2Q6UWQ7 119 aa23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 LINC00696Q6ZRV3 163 aa23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 KCNMB4Q86W47 210 aa23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 LRRC6Q86X45 466 aa23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 RNF10Q8N5U6 811 aaKnown RBP23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 GRHL3Q8TE85 626 aa23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 COG1Q8WTW3 980 aa23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 MIEF2Q96C03 454 aa23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 TREX1Q9NSU2 369 aa23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 STOX2Q9P2F5 926 aaPredicted RBP23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 ZNF282Q9UDV7 671 aaPredicted RBP23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 GUCA1BQ9UMX6 200 aa23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 ZGRF1Q86YA3 2104 aa23.93■■□□□ 1.42
PPP4R4-202ENST00000328839 SVILO95425 2214 aa23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 LOC105369274A0A096LPK9 316 aa23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 LOC102723532A0A0G2JNH3 316 aa23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 VSTM2BA6NLU5 285 aa23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 MAP2K7O14733 419 aa23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 MED26O95402 600 aa23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 ACPPP15309 386 aa23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 RPS3P23396 243 aaKnown RBP eCLIP23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 CCNFP41002 786 aa23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 TSFMP43897 325 aaKnown RBP23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 CARSP49589 748 aaKnown RBP23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 OR4N4Q8N0Y3 316 aa23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 MPP5Q8N3R9 675 aa23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 STT3BQ8TCJ2 826 aa23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 MAGEC3Q8TD91 643 aa23.92■■□□□ 1.42
PPP4R4-202ENST00000328839 FAM136AQ96C01 138 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms