RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 DDHD2O94830 711 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 SCGB1D1O95968 90 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 CLTBP09497 229 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 OR2T7P0C7T2 308 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 VPREB1P12018 145 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 ARL3P36405 182 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 HLCSP50747 726 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 TMF1P82094 1093 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 CD300CQ08708 224 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 AIMP2Q13155 320 aaKnown RBP2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 MAMLD1Q13495 774 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 CAPRIN1Q14444 709 aaKnown RBP2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 ZNF74Q16587 644 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 SLC35D3Q5M8T2 416 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 CES4AQ5XG92 561 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 UGT3A1Q6NUS8 523 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 TMCO3Q6UWJ1 677 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 LEKR1Q6ZMV7 388 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 ZNF841Q6ZN19 808 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 C1orf122Q6ZSJ8 110 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 MAATS1Q7Z4T9 603 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 ADGRF2Q8IZF7 708 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 AFAP1Q8N556 730 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 ATP8B4Q8TF62 1192 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 SPAG5Q96R06 1193 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 KIFC3Q9BVG8 833 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 SLC26A6Q9BXS9 759 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 HOXD1Q9GZZ0 328 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 PARLQ9H300 379 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 HEXA-AS1Q9H8Q6 139 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 TRPV4Q9HBA0 871 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 B3GAT2Q9NPZ5 323 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 FAM207AQ9NSI2 230 aaPredicted RBP2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 IRAK4Q9NWZ3 460 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 NYAP2Q9P242 653 aa2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 ORC3Q9UBD5 711 aaPredicted RBP2.29□□□□□ -2.04
CBX3P1-201ENST00000325243 ANKUB1A6NFN9 424 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 B4E171 279 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 EPB41L2O43491 1005 aaKnown RBP2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 TSPAN1O60635 241 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 KRT33AO76009 404 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 CD4P01730 458 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 GABRA5P31644 462 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 CSTF2P33240 577 aaKnown RBP eCLIP2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 CAPGP40121 348 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 ETV5P41161 510 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 MNDAP41218 407 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 TSPAN7P41732 249 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 SLC9A3P48764 834 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 XGP55808 180 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 POU5F1Q01860 360 aaKnown RBP2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 DDX10Q13206 875 aaKnown RBP2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 G3BP1Q13283 466 aaKnown RBP eCLIP2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 KCTD2Q14681 263 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 TOMM20Q15388 145 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 TAB1Q15750 504 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 EIPR1Q53HC9 387 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 HYIQ5T013 277 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 FAM182AQ5T1J6 154 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 DHRS7BQ6IAN0 325 aaPredicted RBP2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 FAM180BQ6P0A1 224 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 CEACAM19Q7Z692 300 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 SLC25A42Q86VD7 318 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 GPD1LQ8N335 351 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 SUMF1Q8NBK3 374 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 KLHL30-AS1Q8NEE0 82 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 ATXN7L3BQ96GX2 97 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 PSMB7Q99436 277 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 MAP3K3Q99759 626 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 CENPOQ9BU64 300 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 TDRD1Q9BXT4 1180 aaKnown RBP2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 UNC45AQ9H3U1 944 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 GKN1Q9NS71 199 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 ANAPC11Q9NYG5 84 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 SEC63Q9UGP8 760 aaKnown RBP2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 PLAGL1Q9UM63 463 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 ZNF148Q9UQR1 794 aa2.28□□□□□ -2.04
CBX3P1-201ENST00000325243 IGHV4-30-2A0A087WSY4 118 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 A0A0U1RQG5 324 aaPredicted RBP2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 A6NCN8 305 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 TMEM221A6NGB7 291 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 PAPSS1O43252 624 aaPredicted RBP2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 TIMM44O43615 452 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 TBX18O95935 607 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 DARSP14868 501 aaKnown RBP2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 PDHA2P29803 388 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 RXRGP48443 463 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 IRX4P78413 519 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 MPP1Q00013 466 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 MAT1AQ00266 395 aaKnown RBP2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 SETQ01105 290 aaPredicted RBP2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 ZNF415Q09FC8 603 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 EIF4EBP2Q13542 120 aaPredicted RBP2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 CA9Q16790 459 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 CCDC184Q52MB2 194 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 C16orf54Q6UWD8 224 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 VITQ6UXI7 678 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 PP632Q6XCG6 107 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 CDHR3Q6ZTQ4 885 aa2.27□□□□□ -2.05
CBX3P1-201ENST00000325243 FAM131BQ86XD5 332 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms