RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SLC22A17Q8WUG5 538 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 CNPPD1Q9BV87 410 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 LRRC3Q9BY71 257 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 NANOGQ9H9S0 305 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 PRDM8Q9NQV8 689 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 IGSF5Q9NSI5 407 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 ERVK-11Q9UQG0 969 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 CORINQ9Y5Q5 1042 aa14.9□□□□□ -0.02
VARS2-201ENST00000321897 FAM240BA0A1B0GVZ2 78 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 CXCR6O00574 342 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 CTNNB1P35222 781 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 TMBIM6P55061 237 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 SMARCB1Q12824 385 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 SPCS2Q15005 226 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 SULT1C3Q6IMI6 304 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 HMGN2P46Q86SG4 172 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 NDNFQ8TB73 568 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 DIRAS2Q96HU8 199 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 CGREF1Q99674 301 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 CRISPLD1Q9H336 500 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 TIGARQ9NQ88 270 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 ATP6V1HQ9UI12 483 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 TMCC3Q9ULS5 477 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 LTBP4Q8N2S1 1624 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 EIF2S1P05198 315 aaKnown RBP14.89□□□□□ -0.03
VARS2-201ENST00000321897 UMPSP11172 480 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 RFC2P35250 354 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 ALDH3A2P51648 485 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 POLR2LP62875 67 aaKnown RBP14.89□□□□□ -0.03
VARS2-201ENST00000321897 BORAQ6PGQ7 559 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 Q6ZVL8 140 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 GOLGA7Q7Z5G4 137 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 TMEM173Q86WV6 379 aaPredicted RBP14.89□□□□□ -0.03
VARS2-201ENST00000321897 OR13J1Q8NGT2 312 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 ATL1Q8WXF7 558 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 IFRD1O00458 451 aaPredicted RBP14.89□□□□□ -0.03
VARS2-201ENST00000321897 FPGTO14772 594 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 MYL12BO14950 172 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 MYF6P23409 242 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 NFKB2Q00653 900 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 PAGE3Q5JUK9 113 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 FAM124AQ86V42 546 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 UMODL1-AS1Q8N2C9 162 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 MOV10Q9HCE1 1003 aaKnown RBP14.89□□□□□ -0.03
VARS2-201ENST00000321897 ZNF224Q9NZL3 707 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 USP3Q9Y6I4 520 aa14.89□□□□□ -0.03
VARS2-201ENST00000321897 AQP9O43315 295 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 OGNP20774 298 aaKnown RBP14.88□□□□□ -0.03
VARS2-201ENST00000321897 PCBP2Q15366 365 aaKnown RBP eCLIP14.88□□□□□ -0.036e-9■■■■■ 34.9
VARS2-201ENST00000321897 TIGD6Q17RP2 521 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 PTCHD3Q3KNS1 767 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 ZNF404Q494X3 552 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 ERAP2Q6P179 960 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 ALKAL1Q6UXT8 129 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 SPATA19Q7Z5L4 167 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 GTPBP3Q969Y2 492 aaKnown RBP14.88□□□□□ -0.03
VARS2-201ENST00000321897 KIAA1191Q96A73 305 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 AP2M1Q96CW1 435 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 TSPAN18Q96SJ8 248 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 FAM83DQ9H4H8 585 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 PLAC1Q9HBJ0 212 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 CLEC4AQ9UMR7 237 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 PER2O15055 1255 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 ADAM23O75077 832 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 AP2A2O94973 939 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 TGFB1P01137 390 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 ANXA4P09525 319 aaPredicted RBP14.88□□□□□ -0.03
VARS2-201ENST00000321897 MAGEA6P43360 314 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 CLK3P49761 638 aaKnown RBP14.88□□□□□ -0.03
VARS2-201ENST00000321897 RPS14P62263 151 aaKnown RBP14.88□□□□□ -0.03
VARS2-201ENST00000321897 ZXDBP98169 803 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 SPIBQ01892 262 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 GSTM4Q03013 218 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 PPP2R2DQ66LE6 453 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 ZNF544Q6NX49 715 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 CARM1Q86X55 608 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 APCDD1Q8J025 514 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 LSMEM2Q8N112 164 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 RNF175Q8N4F7 328 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 TRPV1Q8NER1 839 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 SEZ6LQ9BYH1 1024 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 EQTNQ9NQ60 294 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 KCNE2Q9Y6J6 123 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 POLR2AP24928 1970 aaKnown RBP14.88□□□□□ -0.03
VARS2-201ENST00000321897 SHROOM3Q8TF72 1996 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 SAGE2PA6NJ88 616 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 SMAD6O43541 496 aaKnown RBP14.88□□□□□ -0.03
VARS2-201ENST00000321897 MT-ND2P03891 347 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 MAGEA3P43357 314 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 HKDC1Q2TB90 917 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 TIMM50Q3ZCQ8 353 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 TMPRSS11AQ6ZMR5 421 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 EIF3MQ7L2H7 374 aaKnown RBP14.88□□□□□ -0.03
VARS2-201ENST00000321897 MFSD6LQ8IWD5 586 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 ADGRG2Q8IZP9 1017 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 MYDGFQ969H8 173 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 RNFT2Q96EX2 444 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 TRIM45Q9H8W5 580 aaPredicted RBP14.88□□□□□ -0.03
VARS2-201ENST00000321897 ERVK13-1Q9NX77 482 aa14.88□□□□□ -0.03
VARS2-201ENST00000321897 KIAA1522Q9P206 1035 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms