RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 CDKN2BP42772 138 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MKRN4PQ13434 485 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 NAE1Q13564 534 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 DSC3Q14574 896 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SLC39A5Q6ZMH5 540 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 LRRC55Q6ZSA7 311 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SMIM5Q71RC9 77 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 C10orf107Q8IVU9 208 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 LSMEM2Q8N112 164 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RHEBL1Q8TAI7 183 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 FNDC8Q8TC99 324 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SLC44A1Q8WWI5 657 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CLEC4DQ8WXI8 215 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PMM1Q92871 262 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 FAM84AQ96KN4 292 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 LMLNQ96KR4 655 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF578Q96N58 590 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CASD1Q96PB1 797 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TSGA13Q96PP4 275 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 LPAR4Q99677 370 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CD320Q9NPF0 282 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RNF186Q9NXI6 227 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 EFCAB7A8K855 629 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ANKRD63C9JTQ0 380 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 M0R129 80 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CASKO14936 926 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 DCLK1O15075 740 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MMP2P08253 660 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SEC24CP53992 1094 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ARHGAP19Q14CB8 494 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SLC25A25Q6KCM7 469 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SYCE2Q6PIF2 218 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 LCTLQ6UWM7 567 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ARHGAP22Q7Z5H3 698 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ADCY4Q8NFM4 1077 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ART4Q93070 314 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RBP7Q96R05 134 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CD180Q99467 661 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ASPNQ9BXN1 380 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 FBRSL1Q9HCM7 1045 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 XPR1Q9UBH6 696 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 DNAJB4Q9UDY4 337 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 DUSP10Q9Y6W6 482 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 UNC5CO95185 931 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OAZ2O95190 189 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RLN2P04090 185 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CYP11A1P05108 521 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CLCN4P51793 760 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 HERVK_113P63132 956 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 FADDQ13158 208 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RNASEH2BQ5TBB1 312 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MANEALQ5VSG8 457 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 KIAA0907Q7Z7F0 614 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ZNF540Q8NDQ6 660 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OR4K17Q8NGC6 315 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OR4K14Q8NGD5 310 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OR5B17Q8NGF7 314 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 GEMIN6Q8WXD5 167 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TFGQ92734 400 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OSTF1Q92882 214 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RDH12Q96NR8 316 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MGME1Q9BQP7 344 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CHID1Q9BWS9 393 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ERVK-6Q9BXR3 956 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 LRRC3Q9BY71 257 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 RHBGQ9H310 441 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MRPL39Q9NYK5 338 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PFDN2Q9UHV9 154 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ING4Q9UNL4 249 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 MED31Q9Y3C7 131 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PDLIM1O00151 329 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PGLSO95336 258 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 HAPLN1P10915 354 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CD44P16070 742 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PREPP48147 710 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TMBIM6P55061 237 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SPIBQ01892 262 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 CHIT1Q13231 466 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 SEMA5AQ13591 1074 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PTPRCAPQ14761 206 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ALG10Q5BKT4 473 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ARSHQ5FYA8 562 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ARSIQ5FYB1 569 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OLFML2AQ68BL7 652 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 GRHL2Q6ISB3 625 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 C3orf67Q6ZVT6 689 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PTCHD4Q6ZW05 846 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ERN2Q76MJ5 926 aaKnown RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 BPHLQ86WA6 291 aaPredicted RBP3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM126BQ8IUX1 230 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PGAM4Q8N0Y7 254 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OR8H2Q8N162 312 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TRAM1L1Q8N609 369 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 OR52K2Q8NGK3 314 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 PPP1R35Q8TAP8 253 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 ELMO3Q96BJ8 720 aa3.12□□□□□ -1.91
CLOCK-201ENST00000309964 TRMT2BQ96GJ1 504 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms