RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 THEMIS2Q5TEJ8 643 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 RAB11FIP2Q7L804 512 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 HDXQ7Z353 690 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 B3GNT8Q7Z7M8 397 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 TRABD2AQ86V40 505 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 LRRC56Q8IYG6 542 aaPredicted RBP17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 OR2L3Q8NG85 312 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 OR8K5Q8NH50 307 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 PGM2Q96G03 612 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 SCYL1Q96KG9 808 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 MAP3K3Q99759 626 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 IQCGQ9H095 443 aaKnown RBP17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 VIPAS39Q9H9C1 493 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 PDE7BQ9NP56 450 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 SPHK1Q9NYA1 384 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 WWOXQ9NZC7 414 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 TMEM9Q9P0T7 183 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 KLHL3Q9UH77 587 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 CIDEBQ9UHD4 219 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 MID2Q9UJV3 735 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 IKZF3Q9UKT9 509 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 GRID1Q9ULK0 1009 aa17.27■□□□□ 0.36
SSSCA1-201ENST00000309328 CACNA1AO00555 2505 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 SPEGQ15772 3267 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 A0A1W2PPV9 198 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 SUPT3HB4E1H0 165 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 COPEO14579 308 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 PLD2O14939 933 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 HYAL3O43820 417 aaPredicted RBP17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 SMIM24O75264 130 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 SUPT3HO75486 399 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 JMJD7P0C870 316 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 TAC1P20366 129 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 PEBP1P30086 187 aaKnown RBP17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 GLRBP48167 497 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 ALDH18A1P54886 795 aaKnown RBP17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 ACY1Q03154 408 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 RELAQ04206 551 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 SLC18A2Q05940 514 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 NAE1Q13564 534 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 CCDC153Q494R4 210 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 SNAP47Q5SQN1 464 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 PRAMEF13Q5VWM6 474 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 ICE2Q659A1 982 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 IGF2-ASQ6U949 168 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 LCTLQ6UWM7 567 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 D2HGDHQ8N465 521 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 C19orf47Q8N9M1 422 aaKnown RBP17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 OR2A1Q8NGT9 310 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 FLVCR1-AS1Q8TAF5 88 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 UBTD2Q8WUN7 234 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 MED8Q96G25 268 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 SMC6Q96SB8 1091 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 ZPBPQ9BS86 351 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 FANCEQ9HB96 536 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 MRPS30Q9NP92 439 aaKnown RBP17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 SOHLH2Q9NX45 425 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 PTBP2Q9UKA9 531 aaKnown RBP17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 MSRB2Q9Y3D2 182 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 ACTL7BQ9Y614 415 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 KCNE2Q9Y6J6 123 aa17.26■□□□□ 0.35
SSSCA1-201ENST00000309328 IGHV5-51A0A0C4DH38 117 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 KLK8O60259 260 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 GFAPP14136 432 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 LSSP48449 732 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 PIK3CGP48736 1102 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 NAA20P61599 178 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 PPP1CAP62136 330 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 TSTA3Q13630 321 aaPredicted RBP17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 FASTKQ14296 549 aaKnown RBP17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 IL11RAQ14626 422 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 TMEM164Q5U3C3 297 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 MBOAT1Q6ZNC8 495 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 SH2D5Q6ZV89 423 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 LRRC70Q7Z2Q7 622 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 TAX1BP1Q86VP1 789 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 C17orf64Q86WR6 236 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 CYP4X1Q8N118 509 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 PLD6Q8N2A8 252 aaKnown RBP17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 FBXO39Q8N4B4 442 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 NXPE2Q96DL1 559 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 CCDC126Q96EE4 140 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 TRAPPC9Q96Q05 1148 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 TEFMQ96QE5 360 aaKnown RBP17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 UNKQ9C0B0 810 aaKnown RBP17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 ATG10Q9H0Y0 220 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 POLR1BQ9H9Y6 1135 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 FBXO8Q9NRD0 319 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 GPRC5BQ9NZH0 403 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 XPR1Q9UBH6 696 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 TAC3Q9UHF0 121 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 SNX7Q9UNH6 387 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 WASF3Q9UPY6 502 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 DYRK1BQ9Y463 629 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 LOXL2Q9Y4K0 774 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 UNC13CQ8NB66 2214 aa17.25■□□□□ 0.35
SSSCA1-201ENST00000309328 A0A1W2PPM1 405 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 A8MU76 341 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 STX16-NPEPL1H3BU86 382 aa17.24■□□□□ 0.35
SSSCA1-201ENST00000309328 STX16O14662 325 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms